Gene Information

Name : SerAS12_1220 (SerAS12_1220)
Accession : YP_004499669.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.4
Position : 1336387 - 1338456 bp
Length : 2070 bp
Strand : -
Note : PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: spe:Spro_1247

DNA sequence :
ATGACTCGCAAACAACGCGCACTGTTTGAACCGGCATTGGTCCGTACCGCGCTGATCGATGCGGTGAAAAAATTGGATCC
GCGCACCCAATGGCGTAACCCGGTGATGTTCGTGGTGTATATCGGCAGCATTTTGACTACCGTCATCTGGCTGGCGATCC
TGGCCAAACAAACCGATGGCAGCGCCGCCTTTACCGGCAGTATCGCCCTGTGGCTGTGGTTCACCGTGCTGTTCGCCAAC
GTTGCCGAAGCGCTGGCCGAGGGGCGCAGCAAGGCGCAGGCAGAAAGCCTGAGGGGCACCAAGAAAACCAGTTGGGCGAA
GAAATTGGCCGCGCCGCGCCGTGACGGTGCCACCGAGAAAGTGTCAGCCGAGAGCCTGCGCAAGGGCGACGTGGTGCTGG
TGGAAGCCGGCGATACCATCCCTTGCGACGGTGAGGTGCTGGAAGGCGGCGCGTCAGTAGATGAAAGCGCCATTACCGGT
GAGTCTGCGCCGGTGATACGCGAATCCGGCGGCGACTTCTCGTCAGTGACCGGCGGCACCCGCGTACTGTCCGACTGGCT
GGTGGTACAGTGCAGCGTCAACCCCGGCGAAACCTTCCTCGATCGGATGATCGCTATGGTGGAAGGCGCCAAGCGGCGTA
AAACTCCGAACGAGGTGGCGCTGACCATTCTGCTGGTGGCGCTGACCATCGTGTTCGTGCTGGCGACCGCTACGCTGTTC
CCGTTCTCGCAATACAGCGTGGATGCCGCCAAGGGCGGGTCAGTCGTCAGCATCACCGTGCTGGTGGCGCTGCTGGTCTG
CCTGATCCCAACGACTATCGGTGGCCTGCTGTCTGCCATCGGCGTGGCGGGGATGAGCCGGATGCTGGGTGCCAACGTGA
TCGCCACCAGCGGCCGTGCGGTAGAAGCGGCTGGCGACGTTGACGTGCTGCTGCTGGACAAAACCGGCACCATCACGCTG
GGTAACCGTCAGGCCTCCGAGTTTCTGCCTGCACCTGGCGTGAAGGAACAGGATCTGGCCGATGCGGCGCAGTTGTCCTC
ACTGGCCGATGAAACGCCGGAAGGCCGCAGCATTGTGGTGCTGGCCAAGCAGCGCTTTAACCTGCGCGAACGCGACCTGC
AGGCACTGAACGCCACTTTCGTGCCCTTCTCCGCCCAGACGCGCATGAGCGGCGTCAACGTGCAGGACCGCATGATCCGC
AAAGGAGCAGTGGATGCCATTCGCCGCCATGTGGAATCCAATCAGGGCCACTTCCCGCAGGCGGTGGACGATCTGGTGGC
TAGCGTAGCGCGCACCGGCGGTACGCCGCTGGTGGTGGCCGAAGGGCCGCGGGTGTTGGGCGTGGTAGCGCTGAAAGATA
TCGTCAAGGGCGGCATTAAAGAGCGTTTCGCCGAGCTGCGTAAAATGGGCATCAAAACGGTGATGATCACCGGCGATAAC
CCCTTGACCGCAGCGGCGATCGCCGCCGAAGCCGGCGTGGATGACTTCCTGTCGGAAGCCACGCCGGAAGCCAAACTGGC
GCTGATCCGTCAGTACCAGGCGGAAGGTCGGCTGGTGGCGATGACCGGCGACGGCACCAACGATGCCCCGGCACTGGCGC
AGGCCGACGTGGCGGTAGCGATGAACTCGGGCACCCAGGCCGCCAAAGAGGCGGGCAACATGGTCGATCTGGACTCCAAC
CCGACCAAGCTGATTGAAGTGGTGCATATCGGTAAACAGATGCTGATGACGCGCGGTTCTCTGACCACCTTCAGTATCGC
CAACGACGTGGCGAAGTATTTCGCCATTATCCCGGCGGCGTTCGCGGCAACCTATCCGCAGTTGAACGCGCTGAATGTAA
TGCACCTGCACTCCCCCGCTTCCGCCATTATGTCGGCGGTCATTTTCAACGCCCTGGTGATCGTGTTCCTGATCCCGCTG
GCGCTGAAAGGGGTGAGCTATAAGCCCATGAGCGCCGCAGCGCTGCTGCGCCGCAACCTGTGGATGTACGGTGTGGGTGG
CCTACTGGTGCCCTTTGTCGGCATCAAGCTGATCGATCTGGTCCTGGTCGCCTTGCATATCGCCGGTTAA

Protein sequence :
MTRKQRALFEPALVRTALIDAVKKLDPRTQWRNPVMFVVYIGSILTTVIWLAILAKQTDGSAAFTGSIALWLWFTVLFAN
VAEALAEGRSKAQAESLRGTKKTSWAKKLAAPRRDGATEKVSAESLRKGDVVLVEAGDTIPCDGEVLEGGASVDESAITG
ESAPVIRESGGDFSSVTGGTRVLSDWLVVQCSVNPGETFLDRMIAMVEGAKRRKTPNEVALTILLVALTIVFVLATATLF
PFSQYSVDAAKGGSVVSITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITL
GNRQASEFLPAPGVKEQDLADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQALNATFVPFSAQTRMSGVNVQDRMIR
KGAVDAIRRHVESNQGHFPQAVDDLVASVARTGGTPLVVAEGPRVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDN
PLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN
PTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMHLHSPASAIMSAVIFNALVIVFLIPL
ALKGVSYKPMSAAALLRRNLWMYGVGGLLVPFVGIKLIDLVLVALHIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 0.0 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 0.0 63
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-156 57
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-154 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-154 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-154 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-154 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-154 56