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Name : SerAS12_1131 (SerAS12_1131) Accession : YP_004499581.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Virulence Product : two component, sigma54 specific, Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 1235486 - 1236823 bp Length : 1338 bp Strand : - Note : KEGG: dac:Daci_2057 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction re DNA sequence : ATGGCCTGTGTGTTGATTGTTGATGACGATGGCGCTTTCCGTGCCAGCCTGGCTGAAGCCGTGACCGATTTGCATCATCA CGCGATAGAGGCGGACGGTACATTGGCCGGACTGGAACAGCTTCGCGCAGGTCATGTCGCTGTCGCTATTGTGGATTTAC GCATGCCGGGTGATGACGGACTGGTCTTCCTGCGTCAGGCCCGCAGGCTCGCACCCGGCGTGCCCTGCATTATGTTAACG GCGCATGCCAGCGGGGGTAATACCATTGAGGCAATGCGGATGGGTGCCTTTGATCACCTGACGAAACCCATTGGCCGGGC TGCGCTGCAAGAGGTGCTAATGCGTGCCCTGAGGCAGAGCGAGGAAGATCAGAGCGCGTCAAAACCGTCTGCCGAGAGGC CATCCCCTGACGATGATCTGGTCGGGAGTAGCGAGGCCATGCGACAGGTTTTTAAACGTATTGGCCAGGTGGCAAACAGT GATGTCACCGTACTGGTTATGGGGGAGACAGGAACAGGGAAAGAATTGGTGGCCCGCGAGCTACATCGTAACAGTTCGTA CTCCACCGGGCCTTTCATCGCGGTAAATTGCTCGGCAATCCCGACGGATCTGATAGAAAGCGAATTGTTTGGGCATGTAA AGGGGGCGTTTTCCGGTGCCATATCGGATCGTATTGGGCGATTCCGAGAGGCTGAGGGGGGTACCCTGTTTTTGGATGAA ATCGGTGATATGCCGTTGCCGACACAAGCGAAAATTTTACGAACATTGCAGGAGCGAGAGGTCACTCCCGTCGGGGGAGC TCGCACTTATCCGGTGAAGGTGCGCATCGTTGCCGCTACGCATCATGATCTGCCTTTGGCGGTGCGGGAAGGCAGTTTCC GTGAAGATTTATGGTATCGGCTACAGGTCATCACCATTACGTTGCCCCCGCTGCGTGAACGCCTGGGAGACGTGATTTTA CTGGCGGAACATTTTTTACGACGTTCGGGGGGCGATACACCCAAACGTCTTTCCCATCAGGCCGCTCAGGTGTTGCTGGC GCATCTGTGGCCGGGGAACGTGCGTGAGTTGCAGAATGCCATAAAAAGGGCATCAGTGCTCAGTCAGGGTTCGATTATTG ACCCTAACCAACTGGGGTTGTGTGCCTCTCCGGTAGAGAGCCCGGGACCGGTGCTGAACTGGGATGGTACGCTGGAAGAG ACCATGGCGGCCATTGAGCGGGAGATGATTATGCGGGCATTGGCGGCAACCGGAGACAACCGGGCTCAAGCGGCCCGTCG GCTTGGCCTTTCGCGTCAGCAGCTTTATCGTAGGCTTGAACATTTTGGCATTAAATAG Protein sequence : MACVLIVDDDGAFRASLAEAVTDLHHHAIEADGTLAGLEQLRAGHVAVAIVDLRMPGDDGLVFLRQARRLAPGVPCIMLT AHASGGNTIEAMRMGAFDHLTKPIGRAALQEVLMRALRQSEEDQSASKPSAERPSPDDDLVGSSEAMRQVFKRIGQVANS DVTVLVMGETGTGKELVARELHRNSSYSTGPFIAVNCSAIPTDLIESELFGHVKGAFSGAISDRIGRFREAEGGTLFLDE IGDMPLPTQAKILRTLQEREVTPVGGARTYPVKVRIVAATHHDLPLAVREGSFREDLWYRLQVITITLPPLRERLGDVIL LAEHFLRRSGGDTPKRLSHQAAQVLLAHLWPGNVRELQNAIKRASVLSQGSIIDPNQLGLCASPVESPGPVLNWDGTLEE TMAAIEREMIMRALAATGDNRAQAARRLGLSRQQLYRRLEHFGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| norR | ABD94719.1 | putative nitric oxide reductase transcriptional regulator | Not tested | ExoU island B | Protein | 5e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS12_1131 | YP_004499581.1 | two component, sigma54 specific, Fis family transcriptional regulator | BAC0467 | Protein | 7e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS12_1131 | YP_004499581.1 | two component, sigma54 specific, Fis family transcriptional regulator | VFG1214 | Protein | 1e-73 | 42 |
