Gene Information

Name : Desca_0642 (Desca_0642)
Accession : YP_004496441.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 709543 - 711132 bp
Length : 1590 bp
Strand : +
Note : PFAM: Transposase, IS66; KEGG: dau:Daud_0704 transposase IS66

DNA sequence :
ATGTCGAAATATAAAGGCATGAATAATATAGTTAATAATACCCAATCCCTCGAAGAACTTCAAAAACTTTGTGCTTTACA
GCAAAAGCAAATCGCTGAACTAACTGCTAAGCTAAACTGGTTTGAGGAACAGTTTCGCTTAAGTAAACAACGGCAATTCG
GGGCTTCAAGCGAAAAAACAGCCTCTGAGCAACAGCAGCTTCTCCTTTTCAATGAAGCCGAAAAGGAAGCCCAAGTACTC
TTGGCTGAGCCGACTTTAGAAACCATTACATATAAACGCAGAAAACAACGTGGGCACCGGGAGATGATGCTTAAAGATCT
CCCGGTTGAAACTATTGAATACCGTCTACCCGTTGAGGAGCAGATCTGCTCTTGTTGTGGCGGGCCGTTGCACGAAATGA
GTACAGAAGTGCGTCAAGAATTGAAAGTTATTCCGGCTCAAGTAAAAATAATTAAACATGTGTCCCATGTTTACGCCTGC
CGTCGTTGTGAACGTGAAAATATAACTACGCCCATTACCACTGCTCCCATGCCCAAACCTGTGCTTCCCGGAAGCTTAGT
TTCCCCTTCAACTATGGCTTTCGTTATGAGCCAGAAATACGTTCAGGGCCTGCCTCTTTATCGCCAGGAACAAGAGTTAG
CTCGTATTGGGATCGAAATCTCTCGCCAAACCCTTGCTAACTGGATGCTCTATGGCGCGAACCGCTGGTTAACACTTCTC
TACGATAGGATGCACCAGCACCTACTAAAGCAGGATATCCTTCATGCTGATGAAACTGTCCTGCAGGTCCTTCATGAACC
GGGGCGGGATGCAGAAGCTAAATCTTATCTCTGGCTGTATCGTACAGGACGTATGGGTCCGCACATTGTCCTTTATGAAT
ACCAGCCAACCCGGGAGGGAGAACATCCCAGCAGGTTTCTTAATGGGTTTAAGGGCTTTCTGCATGTGGATGGTTATAGT
GGTTACAACAAAGTACCGGATGTTATCCTGGTCGGTTGTTGGGCTCACGCTCGGCGTAAGTTTGATGAGGCGCTGAAAGC
TCTACCCCAATCAAAACGTTCAGCCAATGTAGCTGCTAAGGAGGGGCTAGAGTTTTGTAATCGTCTCTTTGCAATTGAGC
GTGAATTAAAAGATGCCACTCCCGAAGAACGTTATAAAACTCGTTTGGCACGCAGCCGCCCTGTGCTGGATGCCTTTTGG
GCGTGGCTTAATGAGCAGAATTCACAGGTGCTTCCCAAAAGTACATTTGGTAAGGCTATACACTATTGCCTTAGCCAGTG
GAATAAGCTCGAGGCCTTTTTGCAAGATGGACGTTTGGAAATTGACAATAACCGTAGCGAACGTTCCATCAAACCTTTTG
TAATTGGCCGTAAGAACTGGCTATTCGCTAACACCCAGCGTGGTGCCAGGGCTAGCGCTGTCATTTATAGCATTGTTGAA
ACGGCCAAGGAAAATGGTTTAAACCCCTTCAACTACCTTAGTTATATTTTTGAGAAACTTCCCAACTCCAATATCAATGA
CCCTAATGTCTTAGATAAGTTTCTCCCCTGGTCGGATACATTACCTGCAAACTGCAGGGTGCATAAATAA

Protein sequence :
MSKYKGMNNIVNNTQSLEELQKLCALQQKQIAELTAKLNWFEEQFRLSKQRQFGASSEKTASEQQQLLLFNEAEKEAQVL
LAEPTLETITYKRRKQRGHREMMLKDLPVETIEYRLPVEEQICSCCGGPLHEMSTEVRQELKVIPAQVKIIKHVSHVYAC
RRCERENITTPITTAPMPKPVLPGSLVSPSTMAFVMSQKYVQGLPLYRQEQELARIGIEISRQTLANWMLYGANRWLTLL
YDRMHQHLLKQDILHADETVLQVLHEPGRDAEAKSYLWLYRTGRMGPHIVLYEYQPTREGEHPSRFLNGFKGFLHVDGYS
GYNKVPDVILVGCWAHARRKFDEALKALPQSKRSANVAAKEGLEFCNRLFAIERELKDATPEERYKTRLARSRPVLDAFW
AWLNEQNSQVLPKSTFGKAIHYCLSQWNKLEAFLQDGRLEIDNNRSERSIKPFVIGRKNWLFANTQRGARASAVIYSIVE
TAKENGLNPFNYLSYIFEKLPNSNINDPNVLDKFLPWSDTLPANCRVHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71494.1 unknown Not tested Hrp PAI Protein 1e-85 41