Gene Information

Name : Desca_0609 (Desca_0609)
Accession : YP_004496411.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 661968 - 662720 bp
Length : 753 bp
Strand : +
Note : PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: drm:Dred_2684 ribonuclease PH

DNA sequence :
ATGGAACGAGTGGATGGCAGAACACCGGGCCAGATTCGCCCGGTTAAAATAACTGCTAATTACAATAAATATGCGGAAGG
ATCGGTTTTAATTGAAATAGGAGATACCCGGGTCATTTGTACCGCTACGGTGGAGGACCGGGTTCCTCCCTTTCTAAAGG
GCCTTGGTAAAGGCTGGGTCACTGCTGAATACTCTATGATCCCCAGGGCTACCGGCACCCGCACCGCCCGGGAAGCCGCC
AAGGGCAAACTGAGTGGCCGAACTATGGAAATCCAGCGGCTAATCGGCCGGGCGCTGCGTTCGGTGGTAGATCTGGAAGC
CCTGGGTGAACGGATGGTGACAATGGACTGCGATGTCATTCAGGCCGATGGCGGCACCCGTACCTCATCTATCACCGGGG
CCTATGTGGCCATGATTTTGGCCTTGAACAAACTGGTGGAACAGGGTATGCTGGAGAAAATACCCGTAAACGACTTCATT
GCTGCCACCAGTGTAGGCATTGTCAACGGAACTCCGGTGTTAGATCTTTGTTACGCCGAGGATTCCGCGGCGGAAGTGGA
TATGAATGTGGTACTCACCGGGACCGGTCGGTTTGTGGAAATCCAGGGTACCGGGGAAGAAGCTACCTTTTCCCGGGATG
AGATGAACCAACTGCTGGATTTAGCTGCCGCCGGGATTAAGGAATTGATTAAAGTACAGCAACAGGTATTGGGCCCGGAA
ATAACCGCAAAAATAGGGCAGGTGCGACAGTGA

Protein sequence :
MERVDGRTPGQIRPVKITANYNKYAEGSVLIEIGDTRVICTATVEDRVPPFLKGLGKGWVTAEYSMIPRATGTRTAREAA
KGKLSGRTMEIQRLIGRALRSVVDLEALGERMVTMDCDVIQADGGTRTSSITGAYVAMILALNKLVEQGMLEKIPVNDFI
AATSVGIVNGTPVLDLCYAEDSAAEVDMNVVLTGTGRFVEIQGTGEEATFSRDEMNQLLDLAAAGIKELIKVQQQVLGPE
ITAKIGQVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-59 55