Gene Information

Name : Desca_0296 (Desca_0296)
Accession : YP_004496112.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 315181 - 315936 bp
Length : 756 bp
Strand : +
Note : KEGG: amt:Amet_4685 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGAATAAAACCCAAGAGGTAAAGGCCCTACTCGGTGAACTACGTCTGAAAAGTGCTAGAGAACAGTTGGATGACCTGTT
GACAACTGCAATCAAGGAAGATACTTCTTGCTTAGAATTTCTTTATCAAGTCCTTCAAAAAGAAGTGATGGCTAGGAATG
CCAACTCCAAGGCTAAAAGATTAAAACAAGCCTCATTCCCCTATATCAAGACCCTAGATGAATTTGACTTTGGTTTTCAA
ACCTCCGTAAGTCGCCGGCAAATACAACAACTAATGGATATGCACTGGATCGAAAAAGCCTTTAACCTGTTGTTCCTGGG
GCCACCAGGAATCGGCAAAACCTTTCTCTCGATAAGTTTAGGGGTTCAGGCCGTTGAGCTAGGCTATCATGTTAGTTTTA
TCACGATGGATGAATTGATAAAAACGCTAAAGACCGAGGCTCTGTCCACCAGGAGCAAGCGAAAGCTAAAGCAAATCATG
ACAGCAGACCTTGTGATAGTGGATGAAGTAGGATTCTTGCCGATTACAAGGCAGGAGGCAAATCTATTCTTTCAACTGGT
TTCAAATCTCTACATGAACACATCCGTGATTGTGACATCTAATAAAGGTTTTGACGAATGGCCCGAGTTCTTTGGCGATC
CGGTTATCACTGCTGCCATTCTGGACAGGCTGGTCCATAACAGCGAACTTTTTAACATGACTGGTGACAGTTATCGCCTG
CATCATAGGAACACTATTCTGGGTAAGACAGACTAG

Protein sequence :
MNKTQEVKALLGELRLKSAREQLDDLLTTAIKEDTSCLEFLYQVLQKEVMARNANSKAKRLKQASFPYIKTLDEFDFGFQ
TSVSRRQIQQLMDMHWIEKAFNLLFLGPPGIGKTFLSISLGVQAVELGYHVSFITMDELIKTLKTEALSTRSKRKLKQIM
TADLVIVDEVGFLPITRQEANLFFQLVSNLYMNTSVIVTSNKGFDEWPEFFGDPVITAAILDRLVHNSELFNMTGDSYRL
HHRNTILGKTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_0296 YP_004496112.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-33 41