Gene Information

Name : Desca_2488 (Desca_2488)
Accession : YP_004498227.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2612798 - 2613682 bp
Length : 885 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: mta:Moth_0009 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
GTGGTAGAAAAAGGAACATGGACTTTAAAAAAGGGTCTGGCTGAGATGCTTAAGGGAGGAGTAATTATGGATGTTACTAC
TCCGGAACAGGCTAAAATTGCGGAGGCAGCAGGGGCCTGTGCAGTCATGGCCCTGGAGCGGGTGCCGGCGGATATCAGGG
CAGCCGGCGGGGTGGCCCGGATGGCTGACCCCACCATTATCAAAAGAATTCAAGATGCCGTCACCATTCCGGTAATGGCC
AAGGCCCGTATCGGGCATTTCGTGGAGGCCCAAATTCTGCAGGCCCTGGGTGTTGATTATATTGATGAAAGTGAAGTGCT
GACACCGGCAGATGATCAGTTTCATATTAATAAGCATGAATTCACCGTACCCTTTGTTTGTGGGGCCCGCAGCTTGGGGG
AGGCCCTGCGCCGCATTGGGGAAGGGGCAGCCATGATTAGAACCAAGGGTGAACCGGGTACCGGCAATGTGGTGGAAGCA
GTTCGCCACATGCGCAAAGTAATGAGCGAAATTCGCAGACTGCAAAATCTGCCCAAGGAAGAACTAATGACTGCGGCCAA
GGAAATGCAGGCTCCCTATGAACTGGTACTGCAGGTGGCCGAGCTGGGCCGCCTGCCGGTGGTTAATTTTGCGGCCGGCG
GTATTGCCACTCCGGCCGATGCCGCGCTAATGATGCAGCTGGGCTGTGACGGTGTTTTTGTGGGTTCCGGCATTTTTAAG
TCTGCTGACCCGGCTGCCCGGGCTAAAGCCATTGTGGCTGCCACCACTCACTACATGGATGCCCAAATCCTGGCGGAAAT
TTCCCGGGATCTGGGGGAAGCCATGCCCGGCCTGGAAATCAGCACCATCGCTGCCACTGACAGAATGCAAGAGCGTGGTT
GGTAG

Protein sequence : 
MVEKGTWTLKKGLAEMLKGGVIMDVTTPEQAKIAEAAGACAVMALERVPADIRAAGGVARMADPTIIKRIQDAVTIPVMA
KARIGHFVEAQILQALGVDYIDESEVLTPADDQFHINKHEFTVPFVCGARSLGEALRRIGEGAAMIRTKGEPGTGNVVEA
VRHMRKVMSEIRRLQNLPKEELMTAAKEMQAPYELVLQVAELGRLPVVNFAAGGIATPADAALMMQLGCDGVFVGSGIFK
SADPAARAKAIVAATTHYMDAQILAEISRDLGEAMPGLEISTIAATDRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-84 69
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-85 69
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-85 69