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Name : Desca_0020 (Desca_0020) Accession : YP_004495837.1 Strain : Desulfotomaculum carboxydivorans CO-1-SRB Genome accession: NC_015565 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 25722 - 26996 bp Length : 1275 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase, class IIa; KEGG: drm:Dred_0015 seryl-tRNA synthetase DNA sequence : ATGTTAGATATTAAATTTGTACGCAGCAATCCTGAACTTGTTAAAGAGGGATTAGCTAAACGCGGTGCCAATATATCGCT GGATGAATTTTTAGAGCTAGATGCCAAGCGCCGGGAAAAACTGGTGGTGGTGGAACAGCTGAAAAACACCCGCAACGTTG TTTCCCAGGAAATTGGCCGGCTTAAAAAAGCCGGGCAAGATGCCGAGGAGAAACAACTGGAAATGCGCCAGGTATCCCAG CAAATTAAAGATATTGACGATGAGATTAGAACCATTGAGGAAAGGTTGGGGGAAATCCTGCTGGCTATCCCCAACCTGCC TCATGAATCCGTGCCGGTGGGCAAAGATGAAAATGATAACCTGGAAGTAAGACGCTGGGGGCGTCCCCGGGAATTTGACT TTACCCCCAAGCCGCACTGGGAACTGGGTGAAGCCTTAAATATCCTGGATTTTGAACGGGCCGGTAAGGTTACCGGGGCA CGCTTTACCTTTTACAAAGGACTGGGTGCCAGGTTGGAGCGGGCTTTAATCAACTTTATGTTGGATTTACATACCCGGGA ACATGGTTATACCGAAGTTTTTCCACCCTTTATCGTAAATAGCGACAGTATGGTGGGTACCGGCCAACTACCCAAGTTTG CCGATGATATGTTTAAGTTAGAAGGATTAAACTATTACCTGATTCCCACTGCCGAGGTTCCGGTAACAAACCTGTATCGG GAAGAGATTTTATCCGGGGAACAGTTGCCCATTTATCACTGCGCCTACAGTGCTTGTTTCCGGGCTGAGGCAGGGGCCGC CGGTAGGGATACCAGAGGTTTAATCCGGCAGCATCAGTTTAATAAAGTTGAATTGGTTAAATTTTGCAAGCCGGAAGATT CCTTTGATGAATTAGAAAAATTAACTGTTAATGCGGAAAAAGTTTTACAGGCACTGGGCTTACCTTATCGTGTGGTGTTG CTTTGCAGTGGCGATATGGGCTTTGCTTCGGCCAAAACCTATGATTTAGAAGTTTGGCTGCCCAGTTATAACGCCTACAA AGAAATATCCTCCTGCAGCAACTTCCAGGATTTCCAGGCCCGCAGAGCTAATATAAAATTCCGGCGGGAACCCAAGAGCA AACCGGAATTTGTACATACCTTAAATGGTTCCGGTGTGGCTATTGGCCGAGCTTTATCGGCTATTTTGGAAAACTACCAG GAGGCAGACGGCAGCATCACGGTGCCGCCGGTGCTGGTACCGTATATGGGCGGAATTGAGAAGATTACTCTGTAA Protein sequence : MLDIKFVRSNPELVKEGLAKRGANISLDEFLELDAKRREKLVVVEQLKNTRNVVSQEIGRLKKAGQDAEEKQLEMRQVSQ QIKDIDDEIRTIEERLGEILLAIPNLPHESVPVGKDENDNLEVRRWGRPREFDFTPKPHWELGEALNILDFERAGKVTGA RFTFYKGLGARLERALINFMLDLHTREHGYTEVFPPFIVNSDSMVGTGQLPKFADDMFKLEGLNYYLIPTAEVPVTNLYR EEILSGEQLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFCKPEDSFDELEKLTVNAEKVLQALGLPYRVVL LCSGDMGFASAKTYDLEVWLPSYNAYKEISSCSNFQDFQARRANIKFRREPKSKPEFVHTLNGSGVAIGRALSAILENYQ EADGSITVPPVLVPYMGGIEKITL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-131 | 63 |
