Gene Information

Name : Desca_2301 (Desca_2301)
Accession : YP_004498048.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 2415342 - 2416910 bp
Length : 1569 bp
Strand : +
Note : KEGG: tai:Taci_1545 type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; PFAM: DNA methylase, adenine-specific

DNA sequence :
ATGGAAAACAACAGAAAAGAACAGGAACGGGCGGAATTACACCGCACGATATGGAATATGGCAAATGATCTAAGAGGCAG
TGTAGATGGATGGGACTTTAAGCAATATGTTCTAGGAATGCTGTTTTACCGCTACATATCTGAAAATATTACTGCCTATA
TTAACGCCGGAGAATGGGAAGCTGGCAATACGGAATTTGATTATGCCAAGCTATCCGACGAAGAAGCAGAACAGGCACGA
GAGGATTTAGTTAAGACAAAAGGCTTCTTTATTTTACCCAGCGAACTTTTTGAAAATGTCCGAGCTCGTGCAAAGGACGA
TGAAAACTTAAATGAAACACTGGAACAGATTTTCAGTAATATAGAAGCATCTGCCCAAGGAACAGAGAGCGAAGATAACT
TCAAAGGCTTGTTTGACGATATTGATGTTAACAGCAATAAGCTAGGTAACACTGTAGCAAAGCGTAATGAAAAGCTGGTT
AAGCTAATGAATTCTGTTGGAGAAATGAAGCTGGGAGATTACAAAGACAATACCATAGATGCATTCGGTGATGCTTATGA
ATTTTTAATGGGTATGTATGCATCCAATGCAGGAAAAAGTGGTGGTGAATACTATACGCCGCAGGAGGTTTCTGAACTCC
TTACCCACTTAACATTAGTAGGAAAAACTGAAGTCAACAAGGTATATGACCCCGCTTGCGGTTCTGGCTCTCTACTGCTA
AAGTTTGCAAAAATCTTAGGAAAAGAAAATGTACGTCAAGGTTTCTTCGGTCAAGAAATCAACATTACAACCTACAACCT
GTGCAGAATTAATATGTTCCTGCACGATATTGATTATGACAAATTTGATATTGCCCTTGGGGACACGCTAACAGATCCGC
AACATTGGGATGATGAGCCTTTTGAAGCCATTGTATCAAATCCTCCATACTCTATTAAATGGAAGGGCGACAATGATCCT
ATTTTGATTAATGACCCTCGCTTTTCTCCAGCGGGAGTATTGGCTCCAAAATCCAAGGCAGATCTTGCTTTTATTATGCA
TAGCCTTTCTTGGCTTGCAACAAACGGAACAGCGGCTATCGTTTGTTTCCCCGGTGTAATGTACCGCGGAGGCGCTGAAA
AGAAAATCAGACAATACCTGATTGATAATAACTATATTGACTGTATCATTCAGTTACCGGATAACTTGTTTTATGGTACC
AGCATTGCTACCTGCATTATGGTGCTGAAGAAGTCAAAATCAGAAAATAGCACCTTATTTATCGATGCATCAAAGGAATT
TGTCAAGGTTACGAATAACAACAAACTAACACAAGAAAATATTGAGACCATTCTTAACGCATTCAAAGATAGAAAAGATA
TTGAGCATTTTGCTAGGCTTGTGCCAAACAGCGAAATTGCTGAACAAGATTATAACCTGTCTGTTTCAACATATGTGGAA
CAAGAGGATACGAGAGAAAAGATTGATATTGTTGCCCTCAATGCTGAAATAGAAAAGATTGTGGCGAGAGAGCAGGTTTT
ACGGGAGGAAATAGATAAGATTATTGCGGAAATTGAGGTGGGCGAATGA

Protein sequence :
MENNRKEQERAELHRTIWNMANDLRGSVDGWDFKQYVLGMLFYRYISENITAYINAGEWEAGNTEFDYAKLSDEEAEQAR
EDLVKTKGFFILPSELFENVRARAKDDENLNETLEQIFSNIEASAQGTESEDNFKGLFDDIDVNSNKLGNTVAKRNEKLV
KLMNSVGEMKLGDYKDNTIDAFGDAYEFLMGMYASNAGKSGGEYYTPQEVSELLTHLTLVGKTEVNKVYDPACGSGSLLL
KFAKILGKENVRQGFFGQEINITTYNLCRINMFLHDIDYDKFDIALGDTLTDPQHWDDEPFEAIVSNPPYSIKWKGDNDP
ILINDPRFSPAGVLAPKSKADLAFIMHSLSWLATNGTAAIVCFPGVMYRGGAEKKIRQYLIDNNYIDCIIQLPDNLFYGT
SIATCIMVLKKSKSENSTLFIDASKEFVKVTNNNKLTQENIETILNAFKDRKDIEHFARLVPNSEIAEQDYNLSVSTYVE
QEDTREKIDIVALNAEIEKIVAREQVLREEIDKIIAEIEVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-98 42
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-98 42
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-99 42
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-98 42
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 9e-99 42
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 6e-98 42
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-99 42
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 6e-99 42
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-98 42
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-101 42
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-98 42
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-98 42
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-97 42
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 1e-98 42
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-98 42
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 2e-98 42
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 1e-98 41
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 1e-98 41
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 3e-98 41
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 1e-98 41
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 1e-98 41
ORF6 BAC22943.1 - Not tested etd PI Protein 3e-98 41