Gene Information

Name : Desca_2300 (Desca_2300)
Accession : YP_004498047.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Resistance
Product : helix-turn-helix domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG3655
EC number : -
Position : 2415116 - 2415337 bp
Length : 222 bp
Strand : +
Note : KEGG: tai:Taci_1546 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence : 
ATGACCGTTAGCTATAAAAAGCTTTGGAAATTGTTGATAGACCGCGATATGAAGAAGAAAGATTTACAAGCTGCTGCGGG
AATAAGTCCATCGTCAATTTCAAAGCTTTCTAAAAACGAATATGTCAGTATGGATGTTCTTGTAAAGGTTTGTACGGCAC
TTGGCGTTGATTTTAAAGATATCATGGAATTAGTGCCTAATATGGTTGAAGAAAGGGAGTAG

Protein sequence : 
MTVSYKKLWKLLIDRDMKKKDLQAAAGISPSSISKLSKNEYVSMDVLVKVCTALGVDFKDIMELVPNMVEERE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01461 YP_003783861.1 hypothetical protein Not tested PiCp 5 Protein 2e-14 53
Cp1002_1456 YP_005681720.1 hypothetical protein Not tested PiCp 5 Protein 7e-14 51
CpC231_1455 YP_005683818.1 hypothetical protein Not tested PiCp 5 Protein 4e-14 51
CpI19_1462 YP_005685904.1 hypothetical protein Not tested PiCp 5 Protein 4e-14 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_2300 YP_004498047.1 helix-turn-helix domain-containing protein DQ212986.1.gene3.p01 Protein 5e-15 56