Gene Information

Name : Desca_2293 (Desca_2293)
Accession : YP_004498040.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 2408669 - 2409349 bp
Length : 681 bp
Strand : -
Note : KEGG: drm:Dred_0712 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal

DNA sequence : 
TTGAGTATAGTAGAAAATATCACAGTCATAAAAAATGAGATAGCCGATGCTGCCTTAAGGGCCGGTCGGCAGCCAAATGA
GGTAAAAATCATTGCTGTTACTAAGAATGTGGCGGCAGCCAAAGCTCAGGAGGCCGTGCGAGCCGGCCTAACGGATCTAG
GTGAAAACAGAGTGCAGGAATTGCAAAACAAGTTTTCCGAGGTCACCGGAGCCAGGTGGCACCTGATAGGTCATTTACAA
TCCAACAAGGTTAAGTACATTGTGGACAAGGTAGATTTAATCCATTCCTTGGATCGCTGGTCATTGGCCCTGGAGATAGA
CCGCCGGGCCAGGGAGGCTGGCAAGGTATTGTCCGCTCTGGTGCAAGTAAATGTGGCCAAAGAGACAACCAAGTTCGGGC
TGCATGTTAATGAAGTCAAGGACTTTGTAACGGAGGCCGCCATCCTTAGGGGTATTTATATCCGGGGATTAATGACCATT
GCCCCCCTGGTGCAGGATCCGGAGGAGGTAAGACCGGTGTTCCGACAACTAAGGCAAATTGCCGAGGATCTCAAGGAAAT
TCCGGGGATCAAGATGGAACACCTCTCCATGGGTATGACCAATGACTACCGGATAGCAGTGGAGGAGGGCGCCACCATGG
TACGGATTGGTACGGCTATCTTTGGTCGGCGGGAGATTTAA

Protein sequence : 
MSIVENITVIKNEIADAALRAGRQPNEVKIIAVTKNVAAAKAQEAVRAGLTDLGENRVQELQNKFSEVTGARWHLIGHLQ
SNKVKYIVDKVDLIHSLDRWSLALEIDRRAREAGKVLSALVQVNVAKETTKFGLHVNEVKDFVTEAAILRGIYIRGLMTI
APLVQDPEEVRPVFRQLRQIAEDLKEIPGIKMEHLSMGMTNDYRIAVEEGATMVRIGTAIFGRREI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-28 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-28 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 4e-28 42
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 4e-28 42