Gene Information

Name : Desca_2154 (Desca_2154)
Accession : YP_004497905.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 2276985 - 2278214 bp
Length : 1230 bp
Strand : -
Note : PFAM: Transposase, mutator type; KEGG: pth:PTH_2357 transposase and inactivated derivatives

DNA sequence :
ATGGCTCAATATCAGATTACCGTAAATCAGGAACTTTTGCACCGTTTATTTTTAAGCGATAACAAAGATTCCGGTGTAGC
AGCTCTGCTGGAATCCGTATTGAACCAAATTTTGCAGGCTCAGGCTACCGAGCAACTAGAAGCCGAACCATATGAGCGCA
CTGAAGAAAGGAAGGGGTATCGCAATGGGACTTATCCACATAAGCTAACCACTCGCGTCGGCACCCTTACCCTGAGAATT
CCTCGGTTTCGCAATGGCAAATTCTCCACAGAACTGTTTGCCAGATACCAGCGCAGTGAACAAGCTCTGGTACTGGCTCT
AATGGAGATGGTAATCAATGGGGTCTCAACCCGTAAGGTGAGCCAAATCACCGAAGAACTTTGTGGAACCGAGTTTTCCA
AATCTACCGTTTCCGAACTGTGCAAGAAGCTAGACCCGGTAGTACATGGCTGGAACAATCGGAATCTGCATGATATGCGC
TACCCTTTTATCCTTGTGGATGCCCTTGTTCTCAAGGTTCGTGAAGAAGGGCGTGTTCGCGCACGTAGTGTGATGATTGC
CATTGGTGTTAACACTGATGGTTACAGAGAAATTCTCGGATTGATGCTGGGTGATAGTGAATCTGAGTCCAGTTGGGGCG
AATTCTTTACCTGGTTAAAATCCCGTGGCTTACGGGGTGTTGATATCATTGTTTCAGATAATCACGGTGGGTTGGTGAAG
GCCGTACGCAGCCATTTTCAGGGTGTTACCTGGCAACGTTGTCAAACCCACTTCATGCGCAACATCCTAGATGTTACCCC
AAAGTCAATACAAGATGAACTCTATCCACATCTAAGAGCTATTCTAGATGCACCGGACGTAGATACCGCCCGTGTGTTAT
TAAATCAAACCCTAGAGGCTTATGAGAACAGGGCTCCAAAGGCCATGAAGGTGTTGGAAGATGGCTTTGATGATGCTACA
GCTATTCTTATTCTGCCAGAACGTTATCGCCGTCGGTTGCGTACCACAAACGGTGTAGAACGCCTTAACGAAGAAATTCG
GCGCAGGGAGCGAGTTATTCGCATTTTCCCCAACCGCGAATCCGTGATCCGTCTAGTAGGTGCCCTCCTTATGGAGTTTG
ATGACAAATGGGCCAGTGGTAGAAAGTATCTGGATATGAGTGAATACCTGCAATGGCAGGAATCTCAGAGACAAGCCCGT
GCTTTTTCTAAGGTAACACCGATTCGGTAG

Protein sequence :
MAQYQITVNQELLHRLFLSDNKDSGVAALLESVLNQILQAQATEQLEAEPYERTEERKGYRNGTYPHKLTTRVGTLTLRI
PRFRNGKFSTELFARYQRSEQALVLALMEMVINGVSTRKVSQITEELCGTEFSKSTVSELCKKLDPVVHGWNNRNLHDMR
YPFILVDALVLKVREEGRVRARSVMIAIGVNTDGYREILGLMLGDSESESSWGEFFTWLKSRGLRGVDIIVSDNHGGLVK
AVRSHFQGVTWQRCQTHFMRNILDVTPKSIQDELYPHLRAILDAPDVDTARVLLNQTLEAYENRAPKAMKVLEDGFDDAT
AILILPERYRRRLRTTNGVERLNEEIRRRERVIRIFPNRESVIRLVGALLMEFDDKWASGRKYLDMSEYLQWQESQRQAR
AFSKVTPIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 9e-75 46
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 9e-75 46
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 9e-75 46
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 7e-75 46
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 7e-75 46
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 7e-75 46