Gene Information

Name : Desca_2071 (Desca_2071)
Accession : YP_004497822.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : tyrosine recombinase xerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2196624 - 2197514 bp
Length : 891 bp
Strand : -
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; KEGG: drm:Dred_1099 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
ATGGAACGTTGGTTGCAAGAATTTATTCATTATCTGGCAGTTGAGCGAGGTTTAGCCCAAAATACATTAGCCTCCTACCG
AATAGACCTCAGCCAGTACCTGTCTCATTTAAAAAAGCAAGGGGTTACCGCCATAGACCAGGCCAATCGGAATCACGTGC
TGACACACCTGTACAAACTGCAAAAGAGCGGCAAGGCACCAGCCACCATTTCCCGGCATTTAGCCGCCCTCAAGCATTTC
TATCGTTTTTTGTTGGCTGACGGGGTGGTGACCGAAGACCCTACGGTTAACCTTGAGTCCCCCAAGTTAGGCCAGCGGTT
GCCCCAGGTACTGACAACTGCGGAAGTGGAAGCACTGCTGAGCCAGCCACAATTGGCTGACCCCGCCGGTTTACGGGACA
AAGCTATGCTGGAACTGATTTACGCCACCGGCATCAGGGTTTCAGAAATGGTAACTCTGGATATAGAGCATGTAGAACTG
GACATGGGATATATCCGCTGTTTTGGTAAAGGATCCAAAGAACGTATTATCCCCCTGGGGGCGGTGGCAGCTCATTACGT
CAGGGAATACCTGGCCAGATCAAGGGTGAAACTAACTAAAGGTAAGACCGAACACAGGGCCCTGTTTGTAAATGCGCAGG
GTAAAAGATTAACCCGCCAGGGTTTCTGGAAAATTCTCAAAAAATATGCCCGGGAGGCTAACATTAATAAACATATTACC
CCCCATACCCTGAGACATTCCTTTGCTACCCACTTATTGGAAAATGGGGCGGATTTAAGGTCGGTGCAGGAAATGTTAGG
TCATGCTGACATTTCTACCACCCAAATTTACACTCACCTGACTAAAATCAGATTACGGGAAGTTTATACCAATGCTCACC
CCCGCGCATAA

Protein sequence : 
MERWLQEFIHYLAVERGLAQNTLASYRIDLSQYLSHLKKQGVTAIDQANRNHVLTHLYKLQKSGKAPATISRHLAALKHF
YRFLLADGVVTEDPTVNLESPKLGQRLPQVLTTAEVEALLSQPQLADPAGLRDKAMLELIYATGIRVSEMVTLDIEHVEL
DMGYIRCFGKGSKERIIPLGAVAAHYVREYLARSRVKLTKGKTEHRALFVNAQGKRLTRQGFWKILKKYAREANINKHIT
PHTLRHSFATHLLENGADLRSVQEMLGHADISTTQIYTHLTKIRLREVYTNAHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-58 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-58 44