Gene Information

Name : Desca_1916 (Desca_1916)
Accession : YP_004497670.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2033345 - 2034070 bp
Length : 726 bp
Strand : +
Note : KEGG: gyc:GYMC61_2739 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGCCAGTTATTATCCGATCTTTGCCGCCAACTTCGCCTGGCATACGTCAGCGAGGCGGTAGAAGAAAAAGCATCACC
TGAGTTATGTACCCTGATAACCGAAGTTTTAAAAGCTGAAATTGAAGGCAGGAAAAGGATGAAACTCAACCGCTTACTAC
ACCGGGCAGGCTTTCCACAAATTAAAACATTGGAAGGTTACTCCTTTGAGCCGATAGCATTTCCTGCCAGTTGTAACCAG
GGGAAGCTAGTAAGCCTTGATTGGATTGCCCAAAAAGAAAATGTATTAATGCTTGGCGCAGTAGGTACCGGCAAAACACA
TCTGGCCATAGCCTTAGGGGTTGAGGCCTGTCGGAAGGGAAAAATTGTACGTTTCTTTCGTGTATCCGACTTGGTGAGTG
TGCTACAACAGAAACATGCCGAAGGTACCCTGACCAAATTCCGTAAAGAATTACTGAAAGCAGACTTATTAATACTGGAC
GAACTAGGGTACGTCCCATTTCATCAGACCGGGTCGGAATTACTTTTCCATGTCATCGCCGATTGCTATGAACGCCAGAG
TGTAATAGTGACTTCCAATCTAGAGTTTGGACAATGGAGTAGCATTTTTGGTGATACAAAATTAACAGCCGCCCTAGTTG
ACAGGTTGGTACACCATGCCCATATTTTAGCCTTCAGCGGAGATAGCTACCGCTTGCGGCATGCATTAGGTAATATTCAA
AACTAA

Protein sequence :
MSQLLSDLCRQLRLAYVSEAVEEKASPELCTLITEVLKAEIEGRKRMKLNRLLHRAGFPQIKTLEGYSFEPIAFPASCNQ
GKLVSLDWIAQKENVLMLGAVGTGKTHLAIALGVEACRKGKIVRFFRVSDLVSVLQQKHAEGTLTKFRKELLKADLLILD
ELGYVPFHQTGSELLFHVIADCYERQSVIVTSNLEFGQWSSIFGDTKLTAALVDRLVHHAHILAFSGDSYRLRHALGNIQ
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-29 44
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 2e-32 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-32 42
unnamed CAA21402.1 - Not tested HPI Protein 7e-32 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-32 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-32 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-32 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-32 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-31 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-32 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-32 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-32 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-32 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-32 42
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_1916 YP_004497670.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 4e-29 44
Desca_1916 YP_004497670.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 3e-32 42
Desca_1916 YP_004497670.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 3e-32 42
Desca_1916 YP_004497670.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 3e-32 42
Desca_1916 YP_004497670.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 7e-32 42