Gene Information

Name : Desca_1795 (Desca_1795)
Accession : YP_004497554.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1915704 - 1917035 bp
Length : 1332 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar export ATPase, FliI, clade 2; ATPase, type III secretion system, FliI/YscN; KEGG: drm:Dred_2405 flagellar protein export ATPase FliI; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F

DNA sequence :
ATGGCGGTTAAGGTTGACATAAACCTTAATCCATATAAAGAACGGGTTAACCGGGCCAGAGTGCTGAAGCCCATTGGTAT
GGTCACCAGAGTAATAGGATTAATGATCGAAGTGCAGGGCATCAGTGCTCGTATTGGCGAGGTCTGCGACATTCTGGTGG
ACGGGGAGCCCGAGCCGGTCAGGGCCGAGGTGGTGGGTTTCCGGGACCAGCACTCGCTGTTAATGCCCCTGGGTGAGCTG
CGAGGTATCTACCCCGGCAGTGCAGTGGTCCCCAGTGGTCGCACCTTGACCGTTAAAGTAGGGGAACACCTGCGGGGTAA
GGTGCTGGATGGTCTGGGTCGGCCTTTGGAAGGGGATATTCATAACGGCCAGGCCGAGGACTTCCCGGTGGATAACCGCC
CCCCCAACCCCTTAAAACGTAAACGTATTGATACCGTGCTGCCCACCGGGGTGCGGGCGGTGGACGCCTTGCTTACCTGT
GGTAAAGGCCAGCGGATTGGTATATTTGCCGGCAGCGGCGTGGGTAAAAGTACCCTTTTGGGTATGATTGCCAGGCATGG
CGGCGCTGATGTAAACGTGATTGGTTTAATCGGTGAGCGGGGCCGGGAGGTGCTGGAATTTTTAGAGGAAGACCTGGGAC
CGGAAGGGATGGCTAAATCCATTGTGGTGGCAGCCACCTCGGATCAACCGGCACTGGTCAGATTAAAGGGGGCCTTTGTG
GCCACCGCCATCGCCGAGTATTTTCGGGACCGTGGACTGGATGTGATGCTGATGATGGATTCGGTCACCCGTTTTGCCAT
GGCCCAGCGGGAAGTTGGCCTGGCGGTGGGGGAACCGCCGGCCACCAAAGGTTATACTCCTTCGGTATTTGCCCTGCTGC
CTAAACTGTTGGAACGGTCCGGCATGGGCCAAAATGGTTCCATTACCGCCTTTTACACGGTGCTGGTGGATGGTGATGAC
CTCAACGAGCCCATTGCCGATGCAGTGCGGGGGATTTTGGACGGCCACATTGTGCTGAATCGTTCATTGGCCTCCCGTAA
CCATTACCCGGCCATTGATGTGCTGCAGAGTGTCAGCCGTTTAATGCCTGATATAGTTTCAGAAGAACACAAGGCCCAGG
CCGGCATGGTCAAGGATTTGCTGGCTGCATACCTGCAGGCAGAGGATTTAATCAACATCGGTGCCTATGTTAAGGGGTCT
AACCCCAAAATTGATGCTGCTATTGCTAAGTATGACGGCATCATAAACTTTTTAAGGCAACAACCGGGGGAATTTAGCAG
CTACGAAGAAACATTGAATGGATTAGCCTCACTGGTGGCGGAGGATAGATAA

Protein sequence :
MAVKVDINLNPYKERVNRARVLKPIGMVTRVIGLMIEVQGISARIGEVCDILVDGEPEPVRAEVVGFRDQHSLLMPLGEL
RGIYPGSAVVPSGRTLTVKVGEHLRGKVLDGLGRPLEGDIHNGQAEDFPVDNRPPNPLKRKRIDTVLPTGVRAVDALLTC
GKGQRIGIFAGSGVGKSTLLGMIARHGGADVNVIGLIGERGREVLEFLEEDLGPEGMAKSIVVAATSDQPALVRLKGAFV
ATAIAEYFRDRGLDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGMGQNGSITAFYTVLVDGDD
LNEPIADAVRGILDGHIVLNRSLASRNHYPAIDVLQSVSRLMPDIVSEEHKAQAGMVKDLLAAYLQAEDLINIGAYVKGS
NPKIDAAIAKYDGIINFLRQQPGEFSSYEETLNGLASLVAEDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-105 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-105 54
lscN AAO18044.1 LscN Virulence TTSS locus Protein 7e-106 53
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-106 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-107 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-106 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-107 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-107 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-107 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-106 53
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-95 52
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-91 51
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-91 51
ECs4568 NP_312595.1 EscN Virulence LEE Protein 8e-89 50
escN AAC38383.1 EscN Virulence LEE Protein 1e-88 50
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-89 50
escN AAC31513.1 L0034 Virulence LEE Protein 6e-89 50
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-89 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 8e-89 50
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-89 50
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-89 50
escN AAK26715.1 EscN Virulence LEE Protein 3e-89 50
escN AAL57542.1 EscN Virulence LEE Protein 3e-89 50
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-89 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-89 50
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-87 50
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-84 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-87 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-87 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-87 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-87 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-87 49
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-78 47
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-81 47
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-81 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-80 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 9e-89 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-81 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-81 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-80 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 7e-81 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-76 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-76 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-74 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-74 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-74 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-74 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 3e-74 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-73 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 4e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-106 55
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0390 Protein 1e-106 54
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0048 Protein 4e-106 54
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0192 Protein 4e-108 52
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG2331 Protein 7e-93 51
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG1254 Protein 2e-98 51
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0812 Protein 4e-89 50
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-89 50
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0515 Protein 1e-87 49
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-94 49
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-77 44
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG2459 Protein 5e-77 43
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG0555 Protein 1e-74 42
Desca_1795 YP_004497554.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-75 42