Gene Information

Name : Desca_1786 (Desca_1786)
Accession : YP_004497545.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1909775 - 1910548 bp
Length : 774 bp
Strand : -
Note : manually curated; TIGRFAM: Flagellar transport protein FliP; KEGG: drm:Dred_2396 flagellar biosynthesis protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence : 
GTGAAGAAAGTAAAAAAGATTAGTTTAGTAACAGTACTGATTCTAATACCGTTATTTATACTTATGCTGCCGTCCGGAGT
TTCGGCGGCCCCCTTGATTCCCATACCAAATATTAATTTAAATGTGGAAACAGCCAGCCAACCCCAGCAGGTGGTGGACA
GTGTTAAGCTGCTGATATTCCTGTCCTTACTGGCCATGGTACCGGCTTTCTTGATTATGCTCACTTCTTTTACCCGTATT
GTGGTGGTGCTGTCCTTTTTACGCAGTGCCTTGGGCACACAACAGACGCCACCCAACCAGGTGCTGGTGGGTTTGGCTTT
ATTCCTAACCATTTTTATCATGTCCCCGGTGTATAAGGACATGAATAAAAATGCCATACAACCTTACTTGGCTAACCAAC
TAACCTACGAGCAGGCCGCGGATAAGGCCATACAGCCCCTTAAAGCCTTTATGGCCCGCCAGACCAGAGAGAAAGACCTG
GGATTGTTTATCAGTGTGGCTAAGATGGATAAACCCAAAAATATAAATGAGGTTCCCATGAGCGTCTTGGTGCCGGCCTT
TGTTATAAGTGAGCTGAAAACAGCCTTTCAAATTGGTTTTATCATTTTCGTTCCCTTTTTGGTGATTGATATGGTGGTGG
CCAGTACCTTAATGTCTATGGGCATGTTTATGTTACCGCCGGTGATGGTTTCCTTACCCTTTAAATTGTTGCTGTTTGTG
ATGGTGGATGGCTGGTATTTGGTGGTTAAATCGCTGGTGGAAAGTTTTCGGTAG

Protein sequence : 
MKKVKKISLVTVLILIPLFILMLPSGVSAAPLIPIPNINLNVETASQPQQVVDSVKLLIFLSLLAMVPAFLIMLTSFTRI
VVVLSFLRSALGTQQTPPNQVLVGLALFLTIFIMSPVYKDMNKNAIQPYLANQLTYEQAADKAIQPLKAFMARQTREKDL
GLFISVAKMDKPKNINEVPMSVLVPAFVISELKTAFQIGFIIFVPFLVIDMVVASTLMSMGMFMLPPVMVSLPFKLLLFV
MVDGWYLVVKSLVESFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-32 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 9e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_1786 YP_004497545.1 flagellar biosynthetic protein FliP VFG2494 Protein 9e-56 59
Desca_1786 YP_004497545.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-53 56
Desca_1786 YP_004497545.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-58 54
Desca_1786 YP_004497545.1 flagellar biosynthetic protein FliP VFG2016 Protein 6e-58 52