Gene Information

Name : Desca_1544 (Desca_1544)
Accession : YP_004497311.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 1673505 - 1674434 bp
Length : 930 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: drm:Dred_2163 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-term

DNA sequence : 
ATGAAACGGAAAATTAAAGTGGGGAGTAGAGACAGTGCTTTAGCCCTTTGGCAGACCCGCTGGGTAGTGGCACAACTGGA
GCAACAAAACCCACATCTATCCTTTGAAATCGTCACCATGAAGACCAAGGGCGATAAAATGTTGGATGTGGCCCTGGCTA
AGATCGGGGACAAGGGGCTTTTTACCAAAGAACTGGAACTGGCGATGCTGAACAAAGAGATAGATTTCGCTGTACACAGC
CTGAAAGATATGCCCACCGCTCTGCCTGCAGGGCTAACCATTGGGGCGGTATGCAAGAGGGACAATTCCGGGGATGCATT
GATCTCCAAGGATGGCCGAAAGTTGGCGGAATTGCCCCAGGGAGCCAGGATTGGCACTTCGTCGCTCAGACGCTGTGCCC
AACTGTTAAATTACCGGCCGGACTTCCGGTTAGAAGCACTGCGAGGCAATTTGAACACCAGAATGAAAAAAATGGCCTCC
CAGCAGTTGGATGCCATTATACTGGCAGCTGCCGGAATTTACCGGATGGGCTGGTCAGATATGATTGCCGAGATTATTCC
CTTTAATGTTTGCTTGCCGGCGGTTGGCCAGGGGGCCATTGCTGTGGAATGCCGGGAAGATGATATAGAAATTAATCAAC
TTCTCCAAGGGGTGGAGCACAAACCCACCAGAGTGGCTACCGATGCTGAGAGATCGTTGCTGCGGCGGTTGGAGGGAGGC
TGCCAGGTGCCCATCGGTGCCTATGGGGAAGTAATAGAGGATAGACTTTCATTGCAGGCTATTGTAGCCACCTTGGATGG
TCAAAGGCTAATCCGGGCACAGGGAGAAGGGGCTTTGAATCAAGCCGAAGAATTGGGTATTGAAGTGGCTGACAAGTTAC
TTAGTATGGGTGGTAAAGAAATTTTGCAACAAGTTAGATCAGGGGATTGA

Protein sequence : 
MKRKIKVGSRDSALALWQTRWVVAQLEQQNPHLSFEIVTMKTKGDKMLDVALAKIGDKGLFTKELELAMLNKEIDFAVHS
LKDMPTALPAGLTIGAVCKRDNSGDALISKDGRKLAELPQGARIGTSSLRRCAQLLNYRPDFRLEALRGNLNTRMKKMAS
QQLDAIILAAAGIYRMGWSDMIAEIIPFNVCLPAVGQGAIAVECREDDIEINQLLQGVEHKPTRVATDAERSLLRRLEGG
CQVPIGAYGEVIEDRLSLQAIVATLDGQRLIRAQGEGALNQAEELGIEVADKLLSMGGKEILQQVRSGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-64 47
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-64 47