Gene Information

Name : Desca_1064 (Desca_1064)
Accession : YP_004496846.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1186767 - 1187894 bp
Length : 1128 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: drm:Dred_2093 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
TTGGACCAAGATAAACATTTCATGCAGATGGCCCTCGAACTGGCCCGCAAGGCCAGGGGGCGCACCAGTCCTAATCCCAT
GGTGGGAGCCGTGGTGGTAAAGGACGGGCAAGTGGTGGGCCAGGGGTGGCATGCTAAGGCCGGTACTGCCCATGCGGAAG
TGGTGGCTTTAGCAGATGCCGGGGAACAGGCCAGGGGCGCCACAGTTTATGTGACTCTAGAGCCCTGCTGTCATCATGGC
AGAACGGGGCCCTGCACCGAGGCCTTATTAAAGGCCGGGGTAAAAAGGGTAGTGGCGGCCATGACCGATCCCAATCCTCT
GGTGGCAGGTAAAGGTTTAGCTATATTAAGGGACGCGGGAGTAGAGGTGCAGGTTGGCGTTTTGGAATCAGAGGCCCGGC
AACTAAACGAGATCTTTATCAAATATATTACCACCGGACGGCCATTTGTGGTCTTAAAGGCAGCCACCAGCCTGGACGGT
AAAATTGCCACTGCCACCGGCGAATCCAAGTGGATTACCGGTGCCGCGGCCAGAACAGAGGGACACCGACTGAGAGATAT
TTACGATGCCATTTTGGTGGGGGTTAATACAATTTTGGCCGATGATCCTGCCCTGACCACCAGGTTACCTGAAGGTCGGG
GCAAAGATCCCATTCGCGTGGTGGTTGACAGCACCGCCCGCACACCCACCAGCGCCAGGGTGCTGATTCAACAATCAGCC
GCCCATACCATTATTGCCACCACCGAAGCGGCACCGGCCGAGCGCAGGGCCAGCTTAATGGCCGCCGGTGCTGAAGTGTT
GGTAGTACCCGGCCAGGGTCCCCGGGTGGACCTGGTTAAGTTAATGGAATTGCTGGGCCAAAGGCAAATTACCAGCGTTT
TAATTGAGGGTGGCGGAAAGATCAATGGTTCAGCATTGGCCGCCGGTATTGTGGATAAAGTAGCCTGGTTTTTAGCTCCT
AAAATTATCGGTGGGGATGCGGCCCCGGGACCAGTCAGGGGTGCCGGTATCATGTCGTTAAATGATGCCACCAAATTATA
TAATGTTTCCCTCCAGCGGGTAGGTGAGGACATTTTAATTACGGGATATACCTCAGAAAGGGGTGACACAATATCTTTAC
CGGAATAG

Protein sequence :
MDQDKHFMQMALELARKARGRTSPNPMVGAVVVKDGQVVGQGWHAKAGTAHAEVVALADAGEQARGATVYVTLEPCCHHG
RTGPCTEALLKAGVKRVVAAMTDPNPLVAGKGLAILRDAGVEVQVGVLESEARQLNEIFIKYITTGRPFVVLKAATSLDG
KIATATGESKWITGAAARTEGHRLRDIYDAILVGVNTILADDPALTTRLPEGRGKDPIRVVVDSTARTPTSARVLIQQSA
AHTIIATTEAAPAERRASLMAAGAEVLVVPGQGPRVDLVKLMELLGQRQITSVLIEGGGKINGSALAAGIVDKVAWFLAP
KIIGGDAAPGPVRGAGIMSLNDATKLYNVSLQRVGEDILITGYTSERGDTISLPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-45 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-45 46