Gene Information

Name : Desca_1042 (Desca_1042)
Accession : YP_004496824.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Resistance
Product : taurine-transporting AtPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.36
Position : 1167038 - 1167871 bp
Length : 834 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: tjr:TherJR_0602 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGGCACTGGCAGTAAAGACCGAGAAGGTAAGAGGTTACGAGGTATGTGGGCCACCCGGAATGGAAGAGGAAACGTACAT
TCCACCCAAAATAGCCGTCAGGGAAGTCAGTAAGGTATATACCTCAAAAAACAAGAGCTTCACTGCACTGGAGAACATAT
CCCTGGAGATCAGGGAAAATGAATTTATCAGTATTGTGGGACCTTCCGGGTGTGGCAAATCCACTCTGTTAAGAATGCTG
GCCGGACTTGAAATGCCTACCCAGGGTAAGATCTGGGTGGAAGGTGATGAGGTTCGGGGACCGGGTGCCGACAGGGGTAT
GGTATTTCAGGCTTATACCCTTTTCCCCTGGCTTACGGTAGCCGATAATATTGCTTTTGGCCTGAAGCTTAAAGGTGTAC
CGGAAATCAGGCGCCGGGAAATAGTGAAAAAATACCTGAACCTGATTGGCCTGGACCGGTTTGCCAACAGCTACCCGAAG
GAGTTATCAGGAGGGATGAAACAGCGGGTGGCTATTGCCAGGGCGCTGGCTAACAATCCGAGTGTGCTTCTAATGGACGA
ACCCTTTGGGGCCCTTGACCCGCAAACCAAGGCGACCATGCAGGAATTGCTGCTTGATATCTGGAGACAGGAAAGGTCTA
CAGTGGTTTTTATCACTCATGATATAGAGGAAGCAATTTTCCTCAGCCGGAGGGTATATGTGATGCAGAGCGGCCCGGGC
CGCATCGTGGCAGAGTTTAAGATCGACCTGCCCGAACAGAGAAACAATGATATTAAAGATACCGAAGCATTTATCAATCT
GAAGAGAAAAATCGTTGCCTTAATCAGAAACTAA

Protein sequence : 
MALAVKTEKVRGYEVCGPPGMEEETYIPPKIAVREVSKVYTSKNKSFTALENISLEIRENEFISIVGPSGCGKSTLLRML
AGLEMPTQGKIWVEGDEVRGPGADRGMVFQAYTLFPWLTVADNIAFGLKLKGVPEIRRREIVKKYLNLIGLDRFANSYPK
ELSGGMKQRVAIARALANNPSVLLMDEPFGALDPQTKATMQELLLDIWRQERSTVVFITHDIEEAIFLSRRVYVMQSGPG
RIVAEFKIDLPEQRNNDIKDTEAFINLKRKIVALIRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-45 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-28 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_1042 YP_004496824.1 taurine-transporting AtPase NC_008702.1.4606598. Protein 1e-26 41