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Name : Desca_1026 (Desca_1026) Accession : YP_004496809.1 Strain : Desulfotomaculum carboxydivorans CO-1-SRB Genome accession: NC_015565 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1145464 - 1148112 bp Length : 2649 bp Strand : - Note : TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: drm:Dred_1599 DNA polymerase I; SMART: 5'-3' exonuclease, DNA sequence : TTGTCTCTGGATACCCTGCTCGTGATAGATGGAAACAGTTTAGTCCACCGGGCCTTTCATGCTCTACCCCTGCTGTCCAA CAGTAAAGGTGTCATCACCAATGCGGCCTATGGCTTCACCAATATGCTGTTAAAGGTATTACAGGAGGTTGAACCAGGTT TTGTGGCCGTGGCCTTTGATAAGGGAAAGGTTACTTTTCGTAATGAAGCCTACGCCGACTACAAGGGACACCGCCAAGCC ACCCCGGATGAGTTGAGGCCCCAGTTTGTGATTGTCCGGGATATTCTTAAGGCCATGCGTATTCCTTATTTTGAACTGGC CGGCTACGAAGCGGATGATTTAATCGGTACCATCACTACCCGGGGGGAGGCCACCGGCCTTAATGTAATTATTCTTACCG GTGACCGGGATGCCCTGCAGTTGGTTTCTCCTAAAACCAAAGTTATGCTCACCCGCAAGGGTATCACCGAAATTGAACTT TTTGACGAAGGACTGGTTTGGGATAAATTTGGTGTGACACCTAACCAAATTGTTGATTTAAAGGCTTTGCAGGGAGATGC GTCAGACAACATCCCCGGGGTGCCTGGTATCGGCGCCAAAACAGCGGCGGCCTTGATTAAAGAACACGGTTCCGTGGAAC AGATTATTAAAAACATTGATAATTTGACCCCCAGGCAGCAGAAGTTACTGCGGGGTATGGAAGAACAGGCCATGTTGTCC AAACGTTTGGCCACCATTGTCACAGATGTACCCATGGATCTGGATTTAGCTGCATGTTCCTGGCGGGGACCGGACAACCA GAAATTATTGGAAATTTTTACCGAGCTGGAGTTTAAAACTTTAATTAAACAACTGTTAGAAGGTACTAAATCAAAGAAAA GTCAAGACGGGGCCAAGAAAACTGAAGAATATGTACCACCGGTAAACACCTACCAGGTGGGTTATAAAGTTACCACCAAC CAGGATGACTTTGATGAATTGCTGGTTAACGCCACCCGGGCCGGCAAAGTGGCTTTATATTTAGAAGGCACCCGGCATGA TGGCATTAGCCGAATTTTTGTGGCGGTACCGGAGCAGGATATCTACCTGTTGCCACTCCAAGACACCGACCCCTACCCTG CTTTGACCGTTTTACAGGCCCTGTGCGAGAACAGTGAGATTAAAAAATATTTCCATGATGCCAAGTCAGCTTTGTGGATG CTACACCACCACGGTATAGAGCTCAAATCCCTGGCCTTTGATACAATGGTGGCCGCTTACTTGTTAAATCCCACTGCTTC CGGTTACGATCTAATTGACTTAGCCCTGGAGCACCTGGGCATTGTGCTGCCGGTTAACGGTGAAGTGAGCCTGGCGGCCA AAGCAGACGCCATTCTCAAATTAGCCGGGGAACTGGTCAAAAAACTACACCTGCAGGAAGAAGACCGGCTTTACTTTGAG GTGGAACTACCCCTGGTGCAGGTGTTAGCGGATATGGAAATGGCCGGCGTCACGGTGGATAAGCAGGGCCTTAAAGAAAT GTCCGCAGAACTGCATGATATGATTGAATCCTTGGCCCACCGTATCCACACCCTGGCAGGTGAGGATTTCAATATTAACT CGCCCAAGCAGCTGGGACATATTTTGTTTGAAAAGTTAAAGCTGCCGGTTTACAAAAAAACCAAAACCGGCTACTCCACC GATGCCGAGGTACTGGAAAAACTGGCGGAGGAACACGAAATTGTGGCCTTAATTCTGGAGTACCGCCAGCTGGCCAAGTT AAAGTCCACCTATACCGATGGCCTGGCGGCCCTGGTGGACCCACAAACCGGCAGGTTACACTCCACCTTCCACCAGACGG TAACAGCCACCGGCCGGCTTTCCAGCGCCGAACCCAATTTACAAAATATTCCCATCCGCTTGGAGTCAGGTCGGCGGATC AGAAAAGTGTTTGTTCCCCGGCAAAAGGGCAACCTAATCTTAACGGCGGACTACTCGCAAATTGAGCTGCGGGTGCTGGC CCATATGTCCCAGGATCCCAGTTTCCTGGAGGCTTTCCGGCAGGGTCAGGACATTCATACCCGGACTGCTGCGGAGGTCT TCGGGGTGCCCATGGAGGAAGTCACCCCGGATATGCGCAGTCGGGCCAAGGCAGTAAACTTTGGGATTGTTTACGGTATC AGCGATTTTGGCCTGGCCCGTGATTTAAAAGTCAGCCGCCGAGAAGCTAAAAGCTATATTGATAACTACTTTGCCCGCTG CCCCGGGGTTAAGGATTATATCGACCGGGTAATTAAAGAAGCTAAACATACCGGCTATGTAACTACCTTATTAAACCGGC GCCGTTACCTACCCGATCTGTTTAGCCCCAATTATAACGCCCGCAGTTTTGGCGAACGGGCGGCCATGAATACCCCCATT CAGGGCAGTGCTGCCGATATTATCAAACTGGCCATGGTCAGAGTGGCCAGAGAATTAAGAGAGAGGAACCTGCAGGCTAA ACTGGTGCTGCAGGTACATGATGAATTAATTTTTGATGTGCCGGAATCGGAAGTGAACGAACTGGTAGACCTGGTGCGGG ATTGTATGGAAAATGCTTTACCTTTAGATGTACCGCTGGTGGTTGACGTGAAACTAGGTCCCAATTGGTATGAAGTAAAA CCCATCTAA Protein sequence : MSLDTLLVIDGNSLVHRAFHALPLLSNSKGVITNAAYGFTNMLLKVLQEVEPGFVAVAFDKGKVTFRNEAYADYKGHRQA TPDELRPQFVIVRDILKAMRIPYFELAGYEADDLIGTITTRGEATGLNVIILTGDRDALQLVSPKTKVMLTRKGITEIEL FDEGLVWDKFGVTPNQIVDLKALQGDASDNIPGVPGIGAKTAAALIKEHGSVEQIIKNIDNLTPRQQKLLRGMEEQAMLS KRLATIVTDVPMDLDLAACSWRGPDNQKLLEIFTELEFKTLIKQLLEGTKSKKSQDGAKKTEEYVPPVNTYQVGYKVTTN QDDFDELLVNATRAGKVALYLEGTRHDGISRIFVAVPEQDIYLLPLQDTDPYPALTVLQALCENSEIKKYFHDAKSALWM LHHHGIELKSLAFDTMVAAYLLNPTASGYDLIDLALEHLGIVLPVNGEVSLAAKADAILKLAGELVKKLHLQEEDRLYFE VELPLVQVLADMEMAGVTVDKQGLKEMSAELHDMIESLAHRIHTLAGEDFNINSPKQLGHILFEKLKLPVYKKTKTGYST DAEVLEKLAEEHEIVALILEYRQLAKLKSTYTDGLAALVDPQTGRLHSTFHQTVTATGRLSSAEPNLQNIPIRLESGRRI RKVFVPRQKGNLILTADYSQIELRVLAHMSQDPSFLEAFRQGQDIHTRTAAEVFGVPMEEVTPDMRSRAKAVNFGIVYGI SDFGLARDLKVSRREAKSYIDNYFARCPGVKDYIDRVIKEAKHTGYVTTLLNRRRYLPDLFSPNYNARSFGERAAMNTPI QGSAADIIKLAMVRVARELRERNLQAKLVLQVHDELIFDVPESEVNELVDLVRDCMENALPLDVPLVVDVKLGPNWYEVK PI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 1e-159 | 44 |
