Gene Information

Name : AS9A_4238 (AS9A_4238)
Accession : YP_004495471.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4360515 - 4362071 bp
Length : 1557 bp
Strand : -
Note : -

DNA sequence :
GTGGATCACAACCCACAAGCACTGGAGGAGTTCATGACCGAGTATTCCCGTCCCGGTTCACCTGACGCGCTGATGTCGTT
CCCGTCGCGGTATGACAACTGGATCGGTGGCGAATGGGTAGCGCCCGCGAAGGGCGAGTACTTCGAGAACGTCACCCCAG
TGACTGGCCAGCCATTCGTCGAAATTGCGCGCTCCACCGCCGAAGACATCGAGAAGGCGCTCGACGCCGCGCACGCGGCC
GCGCCCAAATGGGGCAAGACGCCCGTTGCTGTCCGCGCCAACATTCTCAACAAGATCGCTGACCGCATCGAGGAGAACCT
CGAATCCATCGCACTCGCGGAGGCGTGGGACAACGGCAAGCCCATCCGCGAAACACTCAACGCAGACATTCCGCTTGCGA
TTGATCATTTCCGCTACTTCGCGGGTGCGATTCGCGCTCAGGAAGGCTCGCTGTCGGAACTGAACGATGACACCGTTGCC
TACCACTTCCACGAGCCACTCGGCGTGGTCGGACAAATCATTCCGTGGAACTTCCCCATTCTCATGGCTGTCTGGAAGCT
GGCTCCCGCGCTCGCTGCTGGCAACGCCATCGTCCTGAAGCCTGCGGAGCAAACCCCAGCTTCGATCATGTACCTGATCT
CAATTATCGGTGACCTGCTGCCGCCCGGTGTTCTCAACATCGTCAACGGTTTCGGTGTGGAAGCTGGGAAGCCGCTGGCA
TCGAGCAACCGGATCCGGAAGATCGCCTTCACCGGTGAGACCACCACCGGTCGCTTGATCATGCAGTACGCGTCGGAGAA
CCTGATCCCCGTGACTCTCGAACTCGGCGGGAAGAGCCCGAATATCTTCTTCTCGGATGTGCTCGCCCAGAACGACAGCT
ACCAGGACAAGGCGCTCGAAGGCTTCACCATGTTCGCGCTGAACCAGGGTGAGGTGTGCACCTGCCCGTCCCGTGCGCTG
ATCCAGGAAGACATCTACGACGAGTTCCTCGAGCTCGCCGCGATTCGCACCAAGGCAGTACGCCAGGGCAACCCGCTCGA
CACTGACACGATGATCGGTGCCCAGGCATCCAATGATCAGCTCGAGAAGATCCTTTCGTACATCGAGATCGGCAAGAGTG
AAGGCGCACATGTCGTCACCGGCGGTGAGCGTGCGGACCTCGGCGGCGATCTGTCCGGTGGCTACTACGTGCAGCCGACG
ATCTTCACCGGCAACAACAAGATGCGCATCTTCCAGGAAGAGATCTTCGGGCCGGTTGTCTCGGTGACATCCTTCAAGGA
CTTCGATGATGCTATTCGCATCGCGAATGACACGCTGTACGGTCTCGGAGCTGGTGTGTGGTCACGGACCGGGGATACCG
CATACCGCGCGGGGCGAGAGATCCAGGCGGGGCGCGTGTGGACGAACACCTACCACCAGTACCCAGCTCACGCTGCGTTC
GGTGGATACAAGCAGTCGGGTATCGGTCGTGAGAACCACCGGATGATGCTCGATCACTACCAGCAGACCAAGAATCTGCT
GGTGAGCTACGCACCAGGCGCACAAGGCTTCTTCTGA

Protein sequence :
MDHNPQALEEFMTEYSRPGSPDALMSFPSRYDNWIGGEWVAPAKGEYFENVTPVTGQPFVEIARSTAEDIEKALDAAHAA
APKWGKTPVAVRANILNKIADRIEENLESIALAEAWDNGKPIRETLNADIPLAIDHFRYFAGAIRAQEGSLSELNDDTVA
YHFHEPLGVVGQIIPWNFPILMAVWKLAPALAAGNAIVLKPAEQTPASIMYLISIIGDLLPPGVLNIVNGFGVEAGKPLA
SSNRIRKIAFTGETTTGRLIMQYASENLIPVTLELGGKSPNIFFSDVLAQNDSYQDKALEGFTMFALNQGEVCTCPSRAL
IQEDIYDEFLELAAIRTKAVRQGNPLDTDTMIGAQASNDQLEKILSYIEIGKSEGAHVVTGGERADLGGDLSGGYYVQPT
IFTGNNKMRIFQEEIFGPVVSVTSFKDFDDAIRIANDTLYGLGAGVWSRTGDTAYRAGREIQAGRVWTNTYHQYPAHAAF
GGYKQSGIGRENHRMMLDHYQQTKNLLVSYAPGAQGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-146 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-152 60
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-152 60
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-152 60
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-152 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_4238 YP_004495471.1 dehydrogenase VFG0082 Protein 7e-147 61