Gene Information

Name : AS9A_4218 (AS9A_4218)
Accession : YP_004495451.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : ferric siderophore ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 4343245 - 4344312 bp
Length : 1068 bp
Strand : +
Note : -

DNA sequence : 
ATGGTCGGTGTGGCTCATTCGCCGCAGCGCACCACTCGCGATGCCGCAGCACCGGCAACCGGACTCGCCCGGCGCGGTTT
GACGCGCGGGGCGGGTCTCCTCTTCGCCACGTTGCTCCTCGCCGCGACGTGTGCCGCGTCGATTCTCGTCGGGAATCACC
CACTAAGTCTGGACCAGGCTGTGCAGGCGTTCACCGACTACCAGGGCGCTGACACGGACCTGGTGGTCCACCACATCCGC
CTGCCGCGCACGCTCGCGGGACTGTTCGCTGGAATCGCGCTCGGCCTCGCTGGAGCGGTGATGCAGGGACTCACTCGCAA
CCCACTCGCGGGACCAGGGATTCTGGGCATCAATGCGGGAGCCGCGTTCGCGGTGGTCATCGCGATGAGCGCTCTCGGTG
TGACGGCACTGAGCGGGTACATCTGGTTCGCATTCATTGGGGCCGCAGTTGCGGCTGTATTCGTGTACGTCCTGGGTTCA
CTCGGATACGGCGGGGCAACTCCAGTCAAATTGGCTCTCGCTGGCGCTGCTTTCGCGGCGCTAGTCGGGTCCATGACCAC
CGCGATCAGTCTGCTCGACCGCAGCACATTCGACGACTTCCGGTTCTGGGTAGTCGGTTCCCTTACCCGAGCCGACCTGG
GGTCCCTGTCCACTGTGGCGCCATTCATGCTGGTTGGCGCGGTGCTGGCGTTCGCTGTCTCGCGCGCGCTGAACTCCATT
GCGCTGGGTGATGACATGGCCCGCACGCTCGGAGCCAGACTCATCCTCATCCGCATATCTGGCGCTCTGAGTGTTGTCCT
TCTCGCAGGTGCCGCCACCGCCATCGCGGGGCCCATCGGTTTCATTGGACTCGTCGTGCCCCATATAGCGCGCGCAATAG
CCGGTCCCGACTACCGCTGGCTGCTTGTCTGGTGCGTGGTTCTCGCGCCCACAGTGCTCCTGCTTGCGGACATCATTGGC
CGGGTCGCGGTGCAGCCGCAGGAAATCCAGGTGGGCATCGTGACAGCGCTCGCGGGGGCGCCTATCTTCCTGTACTTAGT
CCGCAACCGGAAGGTGGCGAAGCTATGA

Protein sequence : 
MVGVAHSPQRTTRDAAAPATGLARRGLTRGAGLLFATLLLAATCAASILVGNHPLSLDQAVQAFTDYQGADTDLVVHHIR
LPRTLAGLFAGIALGLAGAVMQGLTRNPLAGPGILGINAGAAFAVVIAMSALGVTALSGYIWFAFIGAAVAAVFVYVLGS
LGYGGATPVKLALAGAAFAALVGSMTTAISLLDRSTFDDFRFWVVGSLTRADLGSLSTVAPFMLVGAVLAFAVSRALNSI
ALGDDMARTLGARLILIRISGALSVVLLAGAATAIAGPIGFIGLVVPHIARAIAGPDYRWLLVWCVVLAPTVLLLADIIG
RVAVQPQEIQVGIVTALAGAPIFLYLVRNRKVAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-26 44
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-26 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_4218 YP_004495451.1 ferric siderophore ABC transporter permease VFG0926 Protein 6e-27 47