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Name : clpB (AS9A_4076) Accession : YP_004495310.1 Strain : Amycolicicoccus subflavus DQS3-9A1 Genome accession: NC_015564 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4167197 - 4169752 bp Length : 2556 bp Strand : - Note : - DNA sequence : ATGGAGTCCTTCTCGCCCACCACAAAAGTACAAGCGGCGTTGTCGACCGCGATGCAGGCAGCATCGGCGGCAGGTAACCC TGACATCAGGCCAGTACATCTTCTCGCCGCACTTTTAGACCAGGCCGATGGCGTGGCGGCGCCCTTACTCAAAGCTGTGA GTGCCGACCCGGGCAGCGTGCGGGCGGAAACTGCAGCCCTCGCCGATCGCTTGCCGGTGGTAACGGGCTCCTCGGTGGCC ACTCCGCAGCTGAATCGAGAGGCGCTCGGAGCTATCACCGCTGCACAGAAGCTCGCCACCGAGCTCGACGACGAATATGT GTCCGCGGAGCATGTCCTCGTCGGGCTGGCTGAAGGTGACGGCGACGTCGCGCGGCTTCTGCAGCGCCATGGGGCGACGC CACAGGCGCTGCGTGACGCATTCACTGCGGTTCGCGGAAATTCTCGAGTGACAAGTCCGGACCCCGAGGGGACCTATCAG GCGCTGGAAAAGTACAGCACAGATCTCACGAAACAGGCTCGCGAGGGCAAGCTCGACCCCGTGATCGGACGCGACAACGA AATCCGTCGCGTAATTCAGGTACTGTCCCGCCGGACTAAGAACAACCCGGTACTCATCGGCGAGCCTGGCGTCGGTAAGA CAGCGATCGTCGAAGGGCTCGCGCAGCGCGTCGTCGCAGGCGACGTGCCAGAGAGTCTGCGCGGCAAGACAGTGATCGTG CTGGACTTGGGTTCGATGGTGGCGGGCGCTAAATACCGCGGTGAGTTCGAGGAACGTCTGAAGGCTGTTCTTGATGAGAT CAAGAAGTCCGCAGGCCAGATCGTTACGTTCATCGATGAGATGCATACCATCGTCGGCGCTGGCGCCACCGGCGAATCCG CGATGGATGCAGGAAACATGATCAAGCCGATGCTTGCCCGGGGCGAGCTGCGCATGGTCGGCGCGACAACTCTCGACGAG TATCGAAAGTACATCGAAAAGGACGCGGCACTAGAGCGCCGCTTCCAGCAGGTACTCGTTGGCGAACCCTCCGTGGAAGA CACCGTCGGGATCCTCCGCGGACTGAAAGAGCGTTACGAAGTCCACCATGGTGTCCGGATCACGGATTCGTCGCTCGTCG CGGCCGCAACGCTTTCTGACCGGTACATAACGTCACGATTCTTACCCGACAAAGCGATCGATCTCGTGGACGAGGCAGCA TCACGGCTGCGGATGGAGATCGATTCGCGTCCGGTTGAGGTGGACGAAATAGAACGCGCTGTCCGGCGGCTCGAAATCGA AGAAATGGCCCTCACCAAGGAGACGGACGAGGGATCCAAAGATCGCCTCGAAAAGCTGCGTAAGGAACTCGCCGATGCGC GTGAACGGCTTTCTGAACTCACCGCGCGGTGGCAGAACGAGAAAAAGTCAATCGAATCAGTCCGGGAAATCAAGGAACAG CTCGAGAATCTGCGCGGTGAGTCCGAGCGGGCGGAACGTGACGGCGATCTTGGCAAGGCCGCTGAGCTGCGTTACGGTCG CATTCCGGAGCTCGAGAAGCAACTCGAGGCTGCCGAGGCCGCGTCGCATGGTGGAGATTCCGGCGAGGTCATGCTGAAGG AAGAGGTCGGCCCAGACGATGTTGCGGACGTCGTGTCGGCCTGGACAGGCATCCCAGCTGGCCGTCTGATGGAAGGGGAA ACCGCAAAGCTTCTCCGCATGGAGGACGAACTGCGTCACCGTGTCGTCGGTCAGGATAATGCGGTCCAGGCGGTTTCTGA CGCGGTTCGTCGCGCACGCGCGGGTGTCGCGGACCCAGACCGTCCGACTGGGTCGTTCATGTTCCTTGGGCCCACCGGTG TCGGCAAAACAGAATTGGCAAAGGCACTCGCCGACTTCCTTTTTGATGACGAGCGCGCAATGGTCCGCATCGATATGAGC GAGTACAGCGAGAAGCATGCGGTGGCTCGGCTCGTGGGAGCCCCTCCCGGATACGTTGGTTACGAAGCGGGTGGTCAGCT TACTGAAGCAGTGCGTCGCCGTCCTTATACGGTGGTGCTATTCGATGAGATCGAGAAAGCGCACCCTGATGTTTTCGATA TCCTGCTCCAGGTCCTTGATGACGGTCGACTCACTGATGGCCAGGGACGCACAGTGGACTTCCGGAACGCGATTCTCATA CTCACGTCGAATCTGGGGTCTGGCGGATCCGACGAGATGGTTATGGCCGCGGTTCGGAGCGCATTCAAACCGGAATTCGT TAACCGCCTCGACGACATCGTCATCTTCCGGTCGCTTGCACAGGATCAGTTGGAAGCCATCGTTGAAATTCAGCTGAGGC TGCTGCGTCATCGGCTGGCTGGGCGCCGCCTCGACCTTGCGGTATCCGAGCGCGCACGCGAATGGCTGGCGCGCCGCGGA TACGACCCGGTATATGGTGCACGGCCGTTGCGCCGGCTGATTCAGCAATCCATCGGAGACCAGCTCGCGAAGCTGATCTT GTCAGGGGTAATTCACGACGGCGACACCGTGCCGGTGAATGTTTCCGTCGACGGGGAAAGCCTGGTTCTTGGCTAG Protein sequence : MESFSPTTKVQAALSTAMQAASAAGNPDIRPVHLLAALLDQADGVAAPLLKAVSADPGSVRAETAALADRLPVVTGSSVA TPQLNREALGAITAAQKLATELDDEYVSAEHVLVGLAEGDGDVARLLQRHGATPQALRDAFTAVRGNSRVTSPDPEGTYQ ALEKYSTDLTKQAREGKLDPVIGRDNEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRVVAGDVPESLRGKTVIV LDLGSMVAGAKYRGEFEERLKAVLDEIKKSAGQIVTFIDEMHTIVGAGATGESAMDAGNMIKPMLARGELRMVGATTLDE YRKYIEKDAALERRFQQVLVGEPSVEDTVGILRGLKERYEVHHGVRITDSSLVAAATLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSRPVEVDEIERAVRRLEIEEMALTKETDEGSKDRLEKLRKELADARERLSELTARWQNEKKSIESVREIKEQ LENLRGESERAERDGDLGKAAELRYGRIPELEKQLEAAEAASHGGDSGEVMLKEEVGPDDVADVVSAWTGIPAGRLMEGE TAKLLRMEDELRHRVVGQDNAVQAVSDAVRRARAGVADPDRPTGSFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMS EYSEKHAVARLVGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDILLQVLDDGRLTDGQGRTVDFRNAILI LTSNLGSGGSDEMVMAAVRSAFKPEFVNRLDDIVIFRSLAQDQLEAIVEIQLRLLRHRLAGRRLDLAVSERAREWLARRG YDPVYGARPLRRLIQQSIGDQLAKLILSGVIHDGDTVPVNVSVDGESLVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-97 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004495310.1 | chaperone protein ClpB | VFG2076 | Protein | 3e-108 | 43 |
| clpB | YP_004495310.1 | chaperone protein ClpB | VFG2084 | Protein | 6e-108 | 41 |
