Gene Information

Name : AS9A_3829 (AS9A_3829)
Accession : YP_004495067.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : response regulator, two-component system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3899911 - 3900585 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
GTGCTGCTCGCCGAAGATGACGAAGCAATCGCCGCGCCGCTGTCCAGGGCGCTTGAACGCGAAGGCTACGAGGTGCGTAT
CGCCCCCAACGGCGACGATGCGCTGGAACAGGTGCTGACAGGTACCTGGGACCTGCTGTTGCTGGACCTTGGCCTCCCGG
GAATGGATGGCCTTGAGGTTTGCCGGCAGATCAGGTCGAACAAGCTCGATGTGCCGGTGTTGATGCTTACCGCGCGCACG
GACGAGGTGGACTTTGTTGTGGGCCTCGATGCGGGTGCCGACGACTACGTGGGCAAGCCATTCCGGCTCGCTGAGCTCCT
CGCGCGAGTCCGCGCATTGCTGCGCAGGCATGGCGGGGCCAGTGATGAAGCGTCCATCGAGATCGGTGGTCTGCTACTCG
ATAAGCCCGCACGCCGTGTCCTGCTCGAGGGGAAAGAGCTCTCCCTGGCAAACAAAGAATACGAGTTGCTGAAACTCCTG
ATGGAACACGCAGGTGAGGTCGTCTCCCGGGATCAGATTCAGCGGGAAGTCTGGGGAGACGTCGACCTCCGGGGCTCCAA
GACGCTCGACATGCACATGTCGTGGCTGCGCCGGAAGATCGGTGATGAAGGCCGGGAACTGGGCCGCCGGATTTCGACCG
TCCGTGGTGTCGGATTCCGGTTCAATGCTGACTAG

Protein sequence :
MLLAEDDEAIAAPLSRALEREGYEVRIAPNGDDALEQVLTGTWDLLLLDLGLPGMDGLEVCRQIRSNKLDVPVLMLTART
DEVDFVVGLDAGADDYVGKPFRLAELLARVRALLRRHGGASDEASIEIGGLLLDKPARRVLLEGKELSLANKEYELLKLL
MEHAGEVVSRDQIQREVWGDVDLRGSKTLDMHMSWLRRKIGDEGRELGRRISTVRGVGFRFNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-16 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_3829 YP_004495067.1 response regulator, two-component system BAC0487 Protein 3e-16 43
AS9A_3829 YP_004495067.1 response regulator, two-component system BAC0083 Protein 3e-19 42
AS9A_3829 YP_004495067.1 response regulator, two-component system BAC0638 Protein 2e-13 42
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_010079.5776364.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_002952.2859858.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_007622.3794948.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system AE015929.1.gene1106. Protein 2e-21 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_003923.1003417.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_013450.8614146.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_002951.3238224.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_007793.3914065.p0 Protein 1e-24 41
AS9A_3829 YP_004495067.1 response regulator, two-component system NC_002758.1121390.p0 Protein 1e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_3829 YP_004495067.1 response regulator, two-component system VFG0596 Protein 3e-16 43
AS9A_3829 YP_004495067.1 response regulator, two-component system VFG1389 Protein 2e-19 43
AS9A_3829 YP_004495067.1 response regulator, two-component system VFG0473 Protein 2e-15 43