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Name : gabD (AS9A_3607) Accession : YP_004494845.1 Strain : Amycolicicoccus subflavus DQS3-9A1 Genome accession: NC_015564 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3677027 - 3678490 bp Length : 1464 bp Strand : + Note : - DNA sequence : ATGCCCCCCACCGCTCAGGAAGAGCGCGAAGCGATCGCGTCGGTCCCTACCGGTCTGTTTGTCGGCGGGCAATGGCGCGA GACCGAGAAAACTTTCGCGGTTACCGACCCCTCGACCGGCGAAACGCTGTGTGACGTCGCGGACGCGAATCCTGACGAAG CGATGGCTGCGCTCGATGCAGCCGCCAAAGCCCAGGCTGGCTGGGCCGCCACTCCCGCTAGAGAACGCAGCGAGATCCTC AGCCGCGCCCACCAACTCCTGATCGATGAGAAAGAACGACTCGCTCTCATCATGACGCTCGAGATGGGCAAGCCGCTTGC GGAGGCACGCGGCGAAATCGGCTATGCCGCCGAGTTCTTCCGATGGTTTGCGGAAGAGGCTGTGCGCATTGACGGAGGGT TCATGCCTTCGCCAGCCGGTAACGCACGCTTCCTCGTGACACGCCAGCCTGTCGGACCCAGCATTCTGATCACACCGTGG AACTTCCCGATGGCCATGGGCACGCGCAAGATCGGCCCGGCGATTGCCGCCGGCTGCACCTCTATCATCAAGCCCGCCGA ATTCACGCCGCTCTCCATGCTTGCTCTCGCTGAAATTCTGCAACGTGCCGGACTTCCCGACGGCGTAGTCAACGTTGTCA CCACAACGAACCCCAGCAAGGTGATGCCGCCGCTCATTTACGACCCACGCAGCCGCAAGCTGTCCTTCACCGGATCCACC GAGGTCGGCAAGATCCTCCTTGAGCAGTGCTCGAAGACAGTGATGCGTACATCCATGGAACTTGGGGGCAACGCGCCCTT CATCGTCTTCGAGGACGCAGACATCGACGAAGCCGTGAACGGCGCGATGGCGGCAAAGATGCGCAATATTGGGCAGGCGT GCACCGCCGCCAACCGCATCTACGTACAGCGCGCTGTCGCCGACGAGTTCGTCAGCAAACTCAGCGAGCGCATGGGAGCG CTGGAGATGGGGCGCGGCACAGAAGACGGTGTTGTAGTCGGGCCACTCATCGAGCAGGCGGCGATCGACAAAGTGACTCA GCTCGTGGCTGACGCAACTGACCGCGGCGCCAATATCGTCCTCGGCGGCGAGCGCCCCGAACGGCCAGGCTACTTCTACC CCGCTACTCTTCTGACCGGCGTGCCCGACGACGCTGAGATGGCGAACACAGAAATCTTCGGCCCCGTCGCGGCCGTAAGC GTGTTCGATACAGAGGAAGAGGTCGTCAGTCGCGCGAACAACACGCCGTTCGGGCTAGTGGCGTACGTCTATACAGAAAA TCTCCGACGAGGACTCCGTGTCTGCGAAGCCCTCGAATCGGGCATGGTGGGGCTGAACCAGGGAGTCGTCTCGAATCCGG CGGCACCGTTTGGTGGTGTCAAGGAATCCGGGCTCGGCCGTGAGGGCGGATTCACCGGGATCGATGAGTTCCTTGAGGTC AAGTACGTGGGCGTGCAGATGTAG Protein sequence : MPPTAQEEREAIASVPTGLFVGGQWRETEKTFAVTDPSTGETLCDVADANPDEAMAALDAAAKAQAGWAATPARERSEIL SRAHQLLIDEKERLALIMTLEMGKPLAEARGEIGYAAEFFRWFAEEAVRIDGGFMPSPAGNARFLVTRQPVGPSILITPW NFPMAMGTRKIGPAIAAGCTSIIKPAEFTPLSMLALAEILQRAGLPDGVVNVVTTTNPSKVMPPLIYDPRSRKLSFTGST EVGKILLEQCSKTVMRTSMELGGNAPFIVFEDADIDEAVNGAMAAKMRNIGQACTAANRIYVQRAVADEFVSKLSERMGA LEMGRGTEDGVVVGPLIEQAAIDKVTQLVADATDRGANIVLGGERPERPGYFYPATLLTGVPDDAEMANTEIFGPVAAVS VFDTEEEVVSRANNTPFGLVAYVYTENLRRGLRVCEALESGMVGLNQGVVSNPAAPFGGVKESGLGREGGFTGIDEFLEV KYVGVQM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-92 | 49 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-97 | 47 |
