Gene Information

Name : AS9A_3542 (AS9A_3542)
Accession : YP_004494780.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3615267 - 3616031 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGCGACAATCCGCCAAGCACGTAGTACGAGCAGTCGGCGTGACCAAGACGTACGGTTCGGGTCACGCGACCGTGCA
GGCTCTGCGCAGTGTCGACGTGGATTTCGAGTCCGGTGAGTTCACGGCGATCATGGGGCCATCAGGCTCAGGGAAGTCAA
CCCTGATGCATGTGCTGGCCGGACTCGACACAGTGACGTCAGGGCAAGTGTTTCTGGGCGGGACGGAGCTCACCGCACTC
CCGGATCGCGACCTGACCGAACTGCGCAGGGAGCGCATCGGTTTCGTTTTCCAGGCGTTCAACCTGCTCCCCGTCATCAC
CGCTGAGGAGAACGTGACGCTGCCGTTCCGGCTTGCAGGGAAGACACCGGACCGGGTCTTCTACGAGGAGATCATCAGCA
AGCTGGGCCTAACCAGCAGAATGCATCATCTGCCGCACGAACTGTCGGGAGGCCAGCAGCAACGCGTCGCTGTGGCCCGG
GCGCTGCTGCCGCGGCCTGACGTGATCTTCGCGGACGAACCCACCGGAAACCTGGATTCCCAGTCCGGCACCGAGGTCCT
GTCCTTGCTGCGGCGCAGTGTGCACGACATGGGGCAAACCGTCATCATGGTGACGCATGATCCGGTCGCGGCTTCATACG
CGGACCGGGTGGTGCTGTTTGCAGACGGCGAGCGGTCCGGCGAAATCGCCTCTCCTACAACTGAGTCGGTCCTCGCTGCG
CTCAGCGACCTCAGCGATCCTGCTGTCCGGCTAGGAGCACGCTGA

Protein sequence : 
MARQSAKHVVRAVGVTKTYGSGHATVQALRSVDVDFESGEFTAIMGPSGSGKSTLMHVLAGLDTVTSGQVFLGGTELTAL
PDRDLTELRRERIGFVFQAFNLLPVITAEENVTLPFRLAGKTPDRVFYEEIISKLGLTSRMHHLPHELSGGQQQRVAVAR
ALLPRPDVIFADEPTGNLDSQSGTEVLSLLRRSVHDMGQTVIMVTHDPVAASYADRVVLFADGERSGEIASPTTESVLAA
LSDLSDPAVRLGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-43 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-45 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-45 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-45 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_3542 YP_004494780.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-49 49
AS9A_3542 YP_004494780.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-47 47
AS9A_3542 YP_004494780.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-38 47
AS9A_3542 YP_004494780.1 putative ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-49 44