Gene Information

Name : AS9A_0337 (AS9A_0337)
Accession : YP_004491596.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : chaperone activity ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 347637 - 350192 bp
Length : 2556 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGAGAGGTTCACCGATCGCGCACGGCGCGTTGTTGTCCTGGCTCAAGAAGAAGCCAGGATGCTCAACCATAATTA
CATCGGCACGGAGCACATCCTGCTCGGCCTCATCCACGAGGGCGAGGGGGTGGCGGCCAAGTCCCTCGAATCGCTCGGCA
TCTCGCTCGAAGCGGTCCGCAACCAGGTCGAAGAGATCATCGGCCAGGGGCAGCAGGCGCCGTCCGGTCACATTCCATTT
ACGCCCCGAGCCAAGAAGGTGCTCGAGCTAAGCCTCCGCGAGGCTCTGCAGCTCGGTCACAATTACATCGGCACGGAGCA
CATCCTGCTTGGCCTTATCCGCGAGGGTGAAGGTGTCGCGGCTCAGGTTCTTGTCAAACTCGGCGCGGACCTCACCCGCG
TACGCCAGCAGGTGATTCAGCTTCTTTCCGGATACCAGGGCAAGGAGCCCGCTGAAGCGGGAGTGGGGCGCGGTGAGGCT
GGAACGCCGTCGACGTCGCTCGTGCTCGATCAGTTTGGCCGTAACCTGACTCAAGCTGCGATGGAAGGCAAGCTTGATCC
CGTTATCGGCCGCCAGAAAGAGATCGAACGGGTCATGCAGGTCCTTTCGCGGCGCACCAAGAACAATCCTGTGCTCATCG
GTGAGCCTGGTGTCGGTAAGACCGCTGTGGTCGAGGGTCTCGCGCAATCGATCGTCAACGGTGAAGTGCCCGAGACCCTG
AAGGACAAGCAGCTGTACACGCTTGACCTGGGCTCTCTTGTCGCGGGCAGCCGCTACCGTGGTGATTTCGAGGAGCGCCT
GAAGAAGGTGCTGAAGGAAATCAATACTCGCGGCGACATCATCCTTTTCATCGATGAGCTGCACACGCTCGTTGGTGCAG
GCGCTGCTGAGGGTGCGATCGATGCGGCGTCGATCCTGAAGCCAAAACTGGCGCGCGGTGAACTGCAGACAATTGGTGCC
ACCACACTCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCGCTCGAACGTCGTTTCCAGCCGGTCCAGGTGGGTGA
GCCCTCTGTCGAGCACACCATCGAAATCCTCAAGGGCCTGCGCGACCGCTATGAGGCGCACCACCGTGTCTCGATCACCG
ATGGCGCGCTCGTGGCTGCAGCGACCCTCGCGGATCGATACATCAACGACCGGTTCCTCCCTGACAAGGCCATCGATCTC
ATCGACGAGGCGGGTGCACGTATGCGCATCCGCAGGATGACGGCTCCGCCCGACCTGCGTGAGTTTGATGAGCGGATCGC
GGAGGCGCGCCGTGAGAAAGAATCGGCCATAGACGCCCAGGACTTCGAGAAAGCCGCGAAGCTGCGTGACAAGGAAAAGC
AGCTTGTGGCGCAGCGTGCTGAGCGGGAGAAGCAGTGGCGCTCCGGCGACCTCGATGTAGTCGCTCAGGTCGACGATGAG
CAGATCGCCGAAGTGCTTTCCAACTGGACTGGCATCCCGGTCTTCAAGCTCACCGAAGAAGAGACCAGCCGCCTGCTCCG
CATGGAGGACGAGCTCCACAAGCGCATCATCGGCCAGGAAGATGCTGTCAGAGCTGTCGCCAAGGCGATCAGGCGTACGC
GCGCGGGCCTCAAGGATCCGCGCCGGCCCTCGGGCTCATTCATCTTCGCCGGCCCGTCGGGTGTCGGTAAGACGGAGCTC
TCTAAGGCGCTCGCGAACTTCCTGTTCGGTGACGATGATGCGCTCATTCAGATCGATATGGGTGAGTTCCACGATCGCTT
CACCGCCTCCAGGCTCTTCGGTGCGCCCCCCGGCTACGTCGGCTATGAAGAAGGCGGGCAGCTGACCGAGAAAGTCCGTC
GCAAGCCGTTCTCCGTAGTTCTCTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACACGCTGTTGCAGGTCCTC
GAAGACGGCCGCCTGACGGATGGCCAGGGACGAACGGTTGACTTCAAGAACACGGTGCTGATCTTCACCTCGAACCTCGG
CACCGCGGACATCTCGAAGGCAGTGGGGCTGGGCTTCACCGCAGGCACCAGCGAGGCCTCGAACTACGAGCGCATGAAGC
TCAAGGTCAATGACGAGCTGAAGAAACACTTCCGTCCGGAGTTCCTCAACCGCATCGATGACGTCATCGTGTTCCACCAG
CTGACGCAGGAACAGATCATCGAGATGGTGGACCTGATGACCAACCGTGTCGAGACACAGCTCAAGCACAAGGACATGGC
GCTCGAGCTGACCGAGCAAGCGAAGTCACTTCTCGCGAAGCGGGGCTTCGATCCGGTGCTCGGTGCCAGGCCATTGCGCC
GCACCGTGCAGCGCGAAATCGAAGACCAGCTGTCAGAGAAGATCCTGTTCGGCGAAATCGAGCCAGGTCAGATCATCGTT
GTCGATGTTGAGAACTGGGATGGGACTGGGGCAGGCGAGAACGCCAAGTTCACGTTCCAGGGCACCAAGAAACCAGTTCC
CGTGCCCGATGCGCCAGAAGACGCGCTTGCGGGTGCTGGCGAGAGCGGGCCGTCGCCGGAGTCCGCAGCCGAGTGA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRNQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQLLSGYQGKEPAEAGVGRGEA
GTPSTSLVLDQFGRNLTQAAMEGKLDPVIGRQKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVNGEVPETL
KDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGA
TTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDL
IDEAGARMRIRRMTAPPDLREFDERIAEARREKESAIDAQDFEKAAKLRDKEKQLVAQRAEREKQWRSGDLDVVAQVDDE
QIAEVLSNWTGIPVFKLTEEETSRLLRMEDELHKRIIGQEDAVRAVAKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTEL
SKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVL
EDGRLTDGQGRTVDFKNTVLIFTSNLGTADISKAVGLGFTAGTSEASNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQ
LTQEQIIEMVDLMTNRVETQLKHKDMALELTEQAKSLLAKRGFDPVLGARPLRRTVQREIEDQLSEKILFGEIEPGQIIV
VDVENWDGTGAGENAKFTFQGTKKPVPVPDAPEDALAGAGESGPSPESAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 79
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-95 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_0337 YP_004491596.1 chaperone activity ATPase VFG0079 Protein 0.0 60
AS9A_0337 YP_004491596.1 chaperone activity ATPase VFG0080 Protein 3e-150 51