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Name : lysS (AS9A_0334) Accession : YP_004491593.1 Strain : Amycolicicoccus subflavus DQS3-9A1 Genome accession: NC_015564 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 345264 - 346841 bp Length : 1578 bp Strand : + Note : - DNA sequence : GTGCAACTATCCTGGTCTGCTGTGAGTACTGCGTCTGAATCTGTGAACCCCGCGCACGAGCATGTCTCCGCGCGAGATGC CTCTTTCTCCGAAGAATTCGAGCAGTTGCGGATTCGTCGCGAAAAACGTGACCGCATCATAGAAACCGGGGGCGACGCTT ACCCCGTCACCGTCCGGCGGACGCATACTCTCACCGAAATCAGGGAAAAATACACAGATCTCTCCGCGGGTGACTCAACC GGCGACATCGTCGGTGTCGCCGGTCGGGTCATGTTCATCAGAAATACTGGCAAGCTCTGCTTTGCTGTATTGCAGGAGGG CGCTGGCGCGCAGCTGCAGGTAATGCTGAGCCAGGCTGAAGTGGGTCCGGAATTACTCGCGGCATGGAAGTCCGATGTTG ATCTCGGTGACTTCGTGTTCGTCCATGGTGAAGTGATTAGCTCACGGCGCGGCGAACTGAGTGTCCTTGCGGACACGTGG GAAATGGCGGCGAAAGCGCTACGCCCGTTACCCGTTGCGCACAAGGAACTGAGTGAAGAGGCGCGAATCCGGCAGCGGTA TGTCGACCTCATCGTTCGTCCTGAAGCTCGCGATACCGCCCGTAAGAGGGTCGCGGTAGTTCGAGAACTCCGCAATGCGC TTGAACGCCGCGGTTTTCTCGAGGTCGAAACGCCAATGCTCCAAACGCTGCACGGTGGCGCTGCCGCACGTCCTTTTGTC ACGCACTCGAATGCACTCGATATAGACCTCTACTTGAGGATCGCACCAGAGTTGTTCTTGAAGCGCTGTGTCGTCGGCGG TATCGAGAAGGTGTTTGAGATTAACCGGAACTTCCGCAACGAGGGTGCGGATTCTTCGCATTCGCCCGAGTTCGCGATGC TCGAGACGTATGAGGCTTACGGCACATATGACGACTCCGCGCGGATGACCCGCGAGATCGTTCAGGAGGTCGCAGACGCC GCATTTGGTACGCGACAACTCGTCCTGGCTGATGGTTCGCCGTATGACATCGACGGCGAGTGGCAGGTGCTGGAAATGTA TCCGTCGCTGTCAGAAGCACTCGGTGAGGACGTGACACCTGACACAAATATTGAGCAGTTACGTTCATTCGCGGCGCGCA CCGGACTTGAGATCCCGGAAGGCAAAGGCTACGGCCACGGAAAACTTGTCGAAGAATTATGGGAGCATCTGGTAGGGAAC GATCTCGCCAGGCCTACATTCGTTCGCGACTTCCCTGTCGAGACATCACCTCTGACCAGGCAGCATCGCACGAAGTCCGG CGTAACTGAAAAATGGGATCTCTACGTGCGGGGTTTCGAGTTGGCTACCGGTTACTCGGAGCTTGTTGACCCGGTAATTC AGCGGGAGCGCTTTGTAGATCAGGCACGGCTTGCCGCCGCCGGAGATGACGAAGCGATGGCGCTCGATGAAGATTTTCTT GCTGCTATGGAGCACGGTATGCCGCCCACTACCGGAACGGGTATGGGAATCGATAGGTTGTTAATGGCGCTCACTGGGCT CGGAATCCGTGAAACTATCCTGTTCCCGATAGTTCGTCCGCTTGGAAAACGCCCGTAA Protein sequence : MQLSWSAVSTASESVNPAHEHVSARDASFSEEFEQLRIRREKRDRIIETGGDAYPVTVRRTHTLTEIREKYTDLSAGDST GDIVGVAGRVMFIRNTGKLCFAVLQEGAGAQLQVMLSQAEVGPELLAAWKSDVDLGDFVFVHGEVISSRRGELSVLADTW EMAAKALRPLPVAHKELSEEARIRQRYVDLIVRPEARDTARKRVAVVRELRNALERRGFLEVETPMLQTLHGGAAARPFV THSNALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEGADSSHSPEFAMLETYEAYGTYDDSARMTREIVQEVADA AFGTRQLVLADGSPYDIDGEWQVLEMYPSLSEALGEDVTPDTNIEQLRSFAARTGLEIPEGKGYGHGKLVEELWEHLVGN DLARPTFVRDFPVETSPLTRQHRTKSGVTEKWDLYVRGFELATGYSELVDPVIQRERFVDQARLAAAGDDEAMALDEDFL AAMEHGMPPTTGTGMGIDRLLMALTGLGIRETILFPIVRPLGKRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-159 | 67 |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-68 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004491593.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-68 | 41 |
