Gene Information

Name : AS9A_3241 (AS9A_3241)
Accession : YP_004494486.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 3320127 - 3322202 bp
Length : 2076 bp
Strand : -
Note : -

DNA sequence :
GTGGTCGCAACAGAATCTGCAGAAGCGCTCGACGAGTTATGCGTGAACACCATCCGGACATTGTCCATTGACGCAGTTCA
GGCCGCCAATTCTGGACACCCAGGTACACCGATGGCGATGGCGCCAGTGGCGTACACCCTGTGGCAGCAATTCCTGAGGT
ACGACCCTGCCGCGCCGATTTGGCCGGACCGGGACCGATTCGTGCTGTCCGTCGGTCACGCATCGGCTCTGCTCTACTCG
ATGCTTCATTTGTCTGGTGTTCGCTCCGTCAACCCCGACTATGAGACTCTCGGCGAGCCGGCGGTCAGCATCGATGATCT
TCGCAACTTCAGGCAGCTGGATTCCAAATGCCCGGGACACCCCGAATACCGCTGGACGGCAGGTGTCGAAGCGACCACCG
GCCCACTCGGAACGGGACTTGCCACCAGTGTCGGCATGGCTATCGCGGCCAGATGGCTCGCAGCGTATTTCAATCGGCCC
GGATTTGAGCTATTCACCTACAACACCTACGCCCTGTGCGGTGATGGTGACCTGATGGAAGGGGTCGCCGCGGAGGCAGC
ATCGCTTGCGGGACACCTTGAATTATCGAACCTGTGCTGGATCTACGACAGCAACGAGATCAGTATCGAAGGCAGCACGG
AACTTGCGTTCACCGAAGATGTGGCCACCCGCTTCATCGGTCACCGCTGGCGTGTGTTGCGTGTGCGCGATGCCAATGAC
GCGAAAACCCTGGCTGCGGCGGTGAGTGATTTCCAGGGTGAGACCGAACGGCCCACTCTGATCATTGTTGACAGCCAGAT
CGGATACGGAGCGCCAACGAAACAGGGAACGGCATCGGCGCACGGTGAACCGTTGGGGGAGTCCGAGGCTGCGGCGGCAA
AGCGCTTCTATGGCTGGCCGGAAGATGAGCAATTCCTTGTCCCCGACGGTGTGTATGAGCATTTCGCCGACGGCATCGGT
GCCCGTGGACAGCAATTGCGGAACGAGTGGGAGATTCTCTTTGACCGGTACCGCACTGAGTACCCGGAACTTGCTGGCCA
TCTGGACGCGATGCTGCGCAGGCAACTGCCCGACGGCTGGGACGCGGAGATACCCGAGTACGCAGCCGACGTGAAGGGCA
TTGCCACACGCAGTTCCTCGGGCGAGGTGCTCAATGCGGTAGCGACAAAGTTGCCATGGCTGCTGGGTGGCTCCGCCGAC
CTGGCACCGTCGACGAAGACCCGCCTTACGTTCGACGGCGCCGGCGATTTCAGTTCCGGCGACCTCGGGGGCCGGAATCT
CCATTTTGGGGTGCGGGAGTTCGCGTCGGCGGCGGTGGCGAACGGGCTTGCGCTCGCGAAAATCCGCGCGTATTGGTCGA
CGTTCCTCATTTTTTCTGATTTTGCACGGGGTGCGATACGGCTATCCGCGCTGATGGAACTGCCCGTCATCCACATCTTT
ACGCATGACTCGATCGGGGTAGGTGAAGACGGCCCGACCCATCAGCCTGTGGAGCACCTTGCCTCGCTGCGTGCGATCCC
CGGGCTCGATGTGTTCCGGCCGTGCGACGCCAATGAGGTGGCTGAAACATGGCGCACGGTGATGCCGCTGCAGCATGAGC
CGGCTGCCATTGTGCTCACCAGGCAGAACCTCCCCACCCTGGACCGTCAGCGATACGGGGCTGCCGCTGGCGTCGCGCGC
GGCGCCTACATACTCGCGGACCCTCCAGGTGGCGAAGCCCCTGACGTCATTGTCATCGCGACGGGCAGCGAAGTGCATAT
CGCTGTCGCTGCGTACGAGCAGCTCACAACCGAAGGAGCGCGAGTCCGAGTGGTGAGCATGCCTTGCCAGGAACTTTTCG
ATCGGCAGCCCGCTGAATACCGGCGAATGGTCCTTCCGCCTCATATCACCGCGCGTGTCGCGATTGAGAAGGCATCGACG
TTCGGCTGGGACCGCTACACAGGATTTGAGGGAACGATAGTCGGCATGCATACCTTCGGGGCCTCTGCTCCCTTGAAGGA
GCTGCAGACGAGGTTCGGCTTCACCCCCGATAACCTCACAGAAAGGATTCGCGGATACCTCGAGCCGACGGTGTGA

Protein sequence :
MVATESAEALDELCVNTIRTLSIDAVQAANSGHPGTPMAMAPVAYTLWQQFLRYDPAAPIWPDRDRFVLSVGHASALLYS
MLHLSGVRSVNPDYETLGEPAVSIDDLRNFRQLDSKCPGHPEYRWTAGVEATTGPLGTGLATSVGMAIAARWLAAYFNRP
GFELFTYNTYALCGDGDLMEGVAAEAASLAGHLELSNLCWIYDSNEISIEGSTELAFTEDVATRFIGHRWRVLRVRDAND
AKTLAAAVSDFQGETERPTLIIVDSQIGYGAPTKQGTASAHGEPLGESEAAAAKRFYGWPEDEQFLVPDGVYEHFADGIG
ARGQQLRNEWEILFDRYRTEYPELAGHLDAMLRRQLPDGWDAEIPEYAADVKGIATRSSSGEVLNAVATKLPWLLGGSAD
LAPSTKTRLTFDGAGDFSSGDLGGRNLHFGVREFASAAVANGLALAKIRAYWSTFLIFSDFARGAIRLSALMELPVIHIF
THDSIGVGEDGPTHQPVEHLASLRAIPGLDVFRPCDANEVAETWRTVMPLQHEPAAIVLTRQNLPTLDRQRYGAAAGVAR
GAYILADPPGGEAPDVIVIATGSEVHIAVAAYEQLTTEGARVRVVSMPCQELFDRQPAEYRRMVLPPHITARVAIEKAST
FGWDRYTGFEGTIVGMHTFGASAPLKELQTRFGFTPDNLTERIRGYLEPTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-125 47
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 6e-119 44