Gene Information

Name : AS9A_2630 (AS9A_2630)
Accession : YP_004493877.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : Helix-turn-helix domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2674463 - 2674687 bp
Length : 225 bp
Strand : +
Note : -

DNA sequence :
GTGAGCGACACCATCTACAACCGGATTGCCGTGCTCCGTGTGGAGCGCGGCATCTCCCGGCGTGAACTCTCCGAGGCTCT
TGGTGTCCATTATCAGACCATTGGATACCTCGAACGAGGCGAGTACAGTCCGAGCCTTCACCTTGCTCTCCGCATCGCTG
CGTTCTTCGGTGTGCCCGTAGAGGTCGTTTTCTCGACGGAGCCGTTCCAGCGCATCGGACAGTAG

Protein sequence :
MSDTIYNRIAVLRVERGISRRELSEALGVHYQTIGYLERGEYSPSLHLALRIAAFFGVPVEVVFSTEPFQRIGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0086 NP_938485.1 regulatory protein Not tested Not named Protein 8e-14 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-07 41
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-07 41
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 8e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_2630 YP_004493877.1 Helix-turn-helix domain-containing protein VFG2168 Protein 1e-07 41
AS9A_2630 YP_004493877.1 Helix-turn-helix domain-containing protein VFG2175 Protein 1e-07 41