Gene Information

Name : AS9A_1635 (AS9A_1635)
Accession : YP_004492884.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : putative ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1696615 - 1697559 bp
Length : 945 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAACTTTCCGCTTCGTTCCCCGAAAGTCAGGTTTTGGAGAACACTCATTGCGGCAACAGCCACGATGGGAATTGC
AGCGGTAGTGGCATGCAGCGCACCCGCAGCGAGTGACGCTGACGACGAGCGCCCGCTCGTACTGACTACGTTCACGGTGC
TTGCAGACATGGGCCAGAATGTGGCGGGTGATCACTTTCGCGTGGAATCCATCACCAAGCCCGGCGCGGAGATTCACGGC
TACGAACCGACTCCGTCGGACATGCGCACGGCCGAGAACGCGGCGCTAATTCTCGACAACGGCCTTGGCCTCGAAAGCTG
GTTCGAGAGATTTGTCACGACTGTGCGGGCACCCCACGCAGTCGTCACCGAGGGAATAGAGCCAATCGCGATCAGGGGCG
GCGAATACGAGGGACAAGCCAATCCACACGCCTGGATGTCACCCACAGACGCGCAGGTCTACGTGGACAACATCGCGCAC
GCGTTCGCGGACCTCGACCCCGCAAACAGCGAAGATTTCTACCGCAACGCCGAGTCCTACAAGACCGAGATCGCCGCCAT
TGGCGATGACCTCGTCTCTGCGCTTGCAGAACTGCCCGAGGGCCAGCGCGCGCTAGTCACCTGTGAAGGCGCATTCAGTT
ACCTCACGCGGGACACCGGCTTACAGGAGGGCTATCTCTGGGCAGTAAACCAGGAGCAGGAAGGCACCCCACGGCAGGTC
GCAGACCTCGTGAACTTCGTCCGCTCAAACAACGTACCTGCGGTGTTCTGCGAGTCGACCGTTTCCGATCGCGCGCAGCG
TCAGGTCGCCCGCGAGACCGGCGCGGAGTTCGGCGGAGTGCTGTACGTCGACTCGCTATCTGGACCGGACGGGCCGGTCC
CCACCTATCTCGACCTGCTTCGTCACAGTGCCGATGTGATCGTGGAAGGACTAACAGGATCATGA

Protein sequence : 
MTNFPLRSPKVRFWRTLIAATATMGIAAVVACSAPAASDADDERPLVLTTFTVLADMGQNVAGDHFRVESITKPGAEIHG
YEPTPSDMRTAENAALILDNGLGLESWFERFVTTVRAPHAVVTEGIEPIAIRGGEYEGQANPHAWMSPTDAQVYVDNIAH
AFADLDPANSEDFYRNAESYKTEIAAIGDDLVSALAELPEGQRALVTCEGAFSYLTRDTGLQEGYLWAVNQEQEGTPRQV
ADLVNFVRSNNVPAVFCESTVSDRAQRQVARETGAEFGGVLYVDSLSGPDGPVPTYLDLLRHSADVIVEGLTGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-74 55
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-74 55
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-74 55
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-74 55
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-74 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1635 YP_004492884.1 putative ABC transporter substrate-binding protein BAC0349 Protein 3e-74 55
AS9A_1635 YP_004492884.1 putative ABC transporter substrate-binding protein BAC0439 Protein 4e-71 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1635 YP_004492884.1 putative ABC transporter substrate-binding protein VFG0525 Protein 3e-74 55