Gene Information

Name : AS9A_1634 (AS9A_1634)
Accession : YP_004492883.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : putative cation ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1695809 - 1696618 bp
Length : 810 bp
Strand : -
Note : -

DNA sequence : 
ATGACCTCCCAGCATGCACAGACACCCCCCTCACCCGCCATTGAGGTCCGTGATCTGACGGTCGCCTATCGTTCGCTCGT
CGCCCTGCGCTCAGTGTCGCTGACGGTGCCGTGGGGGCAGGTATACGGGCTGATCGGCACCAACGGATCCGGCAAATCGA
CGCTCTTCAAGTCGATCATGGGCATTCTGCGCCCAAATAGCGGAACTGTTCTGATCAACGGCGGCAGCGCCGCGATCGCG
CGGCGCCGCAGCCTGATCAGTTACGTCCCGCAAAGTGAAGATGTCGACTGGTCGTTCCCCCTCAGTGTCCGCGAGGTGGT
GATGATGGGCCGCTACGGGTCATTGAATTGGCTCCGCACCCCTCGCCGCAAGGACCGCACTGCTGTAAGCGACGCGCTTG
AGAAGGTTGGGATGGCCGACTTTGCCGATCGGCAGATCGGGCAGCTATCAGGCGGGCAGCGTAAACGCGTCTTCGTTGCC
CGCGCACTGGCACAAGGAGCCGCCATTGTGCTGCTCGACGAGCCGTTCACCGGAGTCGACAAAACCAGCGAGGCCACGAT
CTCCTTCCTGTTGCGCAGGCTGGCAGCCGAGGGAAAGACGATCCTTGTTTCCACGCACGATCTCCATTCGCTGCCCGGTC
TCTGCGACGCGGCTGCGCTCATCAACAAGACGGTTCTCCTGCACGGCACGCCTGCGGAAGTGCTGAAGCCGGACAACCTT
GCCCTCGCTTTCGGCGCCAATCCGTTCGCGGCCCGTCATGGCGCCACGACAGGTGGCGCAACGTTCGTCCACGCACCGCT
GGCAGGCTGA

Protein sequence : 
MTSQHAQTPPSPAIEVRDLTVAYRSLVALRSVSLTVPWGQVYGLIGTNGSGKSTLFKSIMGILRPNSGTVLINGGSAAIA
RRRSLISYVPQSEDVDWSFPLSVREVVMMGRYGSLNWLRTPRRKDRTAVSDALEKVGMADFADRQIGQLSGGQRKRVFVA
RALAQGAAIVLLDEPFTGVDKTSEATISFLLRRLAAEGKTILVSTHDLHSLPGLCDAAALINKTVLLHGTPAEVLKPDNL
ALAFGANPFAARHGATTGGATFVHAPLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-56 51
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-57 51
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-57 51
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-56 51
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-56 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 8e-41 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1634 YP_004492883.1 putative cation ABC transporter ATP-binding protein BAC0350 Protein 1e-56 51
AS9A_1634 YP_004492883.1 putative cation ABC transporter ATP-binding protein BAC0440 Protein 3e-55 50
AS9A_1634 YP_004492883.1 putative cation ABC transporter ATP-binding protein BAC0400 Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1634 YP_004492883.1 putative cation ABC transporter ATP-binding protein VFG0526 Protein 1e-56 51