Gene Information

Name : AS9A_1633 (AS9A_1633)
Accession : YP_004492882.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : manganese ABC transporter inner membrane subunit MntB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1694883 - 1695806 bp
Length : 924 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCTTGCTGGACCTGATCCTCGACCCCTTGAACTTCGAGTTCATGCGGCGCGCCGTGATCGTCGCCACGGTCGCCTC
AATAGTGTGCGCACTGCTCAGCTGCTGGCTGATCCTCATTGGGTGGTCGCTGATGGGTGACGCAATCTCCCATGCGGTTC
TTCCCGGCGTTGCGCTCGCGTATCTTTTCGGTGCTCCCTTTGCGCTCGGAGCGCTTGCGTTCGCTCTGGCCGCAGTCGCC
ATGATCGGCACCATACGCCGAACAAGCAGGGTAAAAGAGGATGCCGCGATGGGGATCGTCTTCACCGCGCTGTTTGCGCT
AGGACTGGTACTGATCTCGCGCAACCCTGCGCAGGTCGACCTGATGCACATCCTGTTCGGTAACCTGCTGGGAATTCCCT
CCGCTGATCTGTGGCAAGTAGTCATCCTCGGTGCACTCGCCGCAATCGTGCTGATAGCGAAGCGGCGTGACCTCACGCTT
TATGCGTTTGACAAGACCCATGCGCAGGCGATCGGGATCTCGGCCGGCAAGCTGGGTGCACTTCTCCTCGGCTTGCTCGC
GGTCACGATCGTCGTGGCGCTGCAAGCCGTCGGTGTCATCCTCGTGGTGGCGCTACTCATCACGCCAGGTGCTACCGCCT
ACTTGCTCACCAGCCGATTCAACAGGATGCTTGTTCTCGCCCCGGTCATCGCTGTGGTGTGTTCCTTCGCAGGGATCTAC
TCCTCCTACTACTACGACGCGTCCACGGGCGGGATGATCGTCCTGGCGCAGTCCACTGCATTCGCCCTCGCGTACCTGTT
CAGCCCCAGCCAGGGGCTCGTCACTGGCCTTGTCACCCATCGGCGCACCGCGCCGGCGCCGAACACTCCTCGCGATCTCG
CGCCCGCGACCAACGCGACGGGGCGCGCGGGAGCGGAGAGCTGA

Protein sequence : 
MALLDLILDPLNFEFMRRAVIVATVASIVCALLSCWLILIGWSLMGDAISHAVLPGVALAYLFGAPFALGALAFALAAVA
MIGTIRRTSRVKEDAAMGIVFTALFALGLVLISRNPAQVDLMHILFGNLLGIPSADLWQVVILGALAAIVLIAKRRDLTL
YAFDKTHAQAIGISAGKLGALLLGLLAVTIVVALQAVGVILVVALLITPGATAYLLTSRFNRMLVLAPVIAVVCSFAGIY
SSYYYDASTGGMIVLAQSTAFALAYLFSPSQGLVTGLVTHRRTAPAPNTPRDLAPATNATGRAGAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-31 44
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-31 44
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-31 44
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-31 44
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-31 44
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-28 43
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-28 43
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-28 43
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-28 43
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB BAC0442 Protein 1e-34 45
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB BAC0441 Protein 3e-31 44
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB BAC0352 Protein 2e-31 44
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB BAC0351 Protein 2e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB VFG0528 Protein 2e-31 44
AS9A_1633 YP_004492882.1 manganese ABC transporter inner membrane subunit MntB VFG0527 Protein 2e-28 43