|
Name : AS9A_1570 (AS9A_1570) Accession : YP_004492819.1 Strain : Amycolicicoccus subflavus DQS3-9A1 Genome accession: NC_015564 Putative virulence/resistance : Unknown Product : RNA binding S1:resolvase, RNase H-like fold protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1633480 - 1635843 bp Length : 2364 bp Strand : + Note : - DNA sequence : GTGACTGACCGGATCGCGGAAGAACTGAACGTGGCGCAGTGGCGAGTAGCCGCTGCCATTGCGCTTCTCGACGGGGGATC AACGGTACCGTTCGTCGCCCGCTACCGGAAAGAAGCGACGGGCGGGCTCGATGACGCTGAACTTCGCCAGCTCGAGGAGC GCTTGAGGTATCTCAGAGAACTCGATGAGCGGCGGAGCGCGATCATCGCGTCGATCAAGCAGCAGGGCAAACTCGACGAC GGAATCGAAGCGCAGCTGGTCGGAGCCGAGACGAAATCCCGACTCGAAGACATCTACTTGCCGTTCAAGCCCAAGCGCCG GACGAAAGCTCAAATTGCCCGGGAAGCGGGCCTGGAACCACTGGCCGAACGACTGCTGTCCGACCCCTCCCACGATCCCG CGTCGGTGGCTACGAAATTCGTAGATGAGGAGAAAGGCGTCGCGGACGCTGCGGCCGCCCTTGACGGCGCACGCGCGATC CTGATTGAGCGGGTTTCCGAAGACGCCGATCTTGTGGGTGAACTGCGAGAGTTGATGTGGCGGCGCGGACGGATTGTCTC CTCGGCTCGCAAAGGAAAAGAAGCTGAGGGCGCGAAGTTCGCTGACTACTTCGACTTCGCGGAACCCTTCAGTTCGCTCC CGTCACATCGTGTCCTTGCCCTGTTACGGGGTGAGAAAGAAGAGTTTCTGTCGGTGCAGTTCGATCCTGAACCGGACGCC GAGGGCCCTCCAGGCCCCTCTCTCTACGAACAGAAAATCGCGGTTGCGCTGGGTGTGCGCGACCAGGGGCGGCCGGGTGA CCGCTGGCTCGCCGACACGGTCCGGTGGGCGTGGAAGACTAAGCTGCAAGTCAGTTCGAGCATCGATGTGCGCGCACGAT TGCGGCAGGCCGCTGAGGCTGATGCTGTGGACGTGTTTGCCCGGAACGTTCGGGATTTGCTGCTCTCTGCGCCTGCTGGC CCGCGGATCACGATGGGTCTTGACCCCGCGTACCGCACCGGGGTCAAGGTAGCCGTGGTGGATGGCACGGGGAAGCTGCT CGAAACTGCAACCGTTTACCCGCACAAGCCCCAGTCACAGTGGGACGCCGCACTCGGTGCCCTCGCAGAACTGGTGACTC GCCACAACGTAGACCTCGTTGCGATCGGTAACGGGACAGCTTCCCGTGAGACGGACGCACTCGCTGCCGAACTGCTGAAG CGCATGCCGGAAACGAAACTCACGAAGATGGTGGTTTCTGAGGCGGGAGCTTCCGTGTACTCAGCGTCCGAATACGGTTC CCGCGAGTTACCGGACCTTGATGTTTCGCTGCGTGGGGCGGTGTCGATCGCCCGACGGTTGCAGGATCCCCTCGCGGAAC TCGTGAAGATTGATCCAAAGTCGCTCGGAGTGGGTCAATATCAGCATGACATTGCCGAGGGACTGCTTGCGAGGTCGCTC GATGCGATCGTGGAGGACGCGGTGAACGCCGTGGGCGTCGATGTCAACACCGCGTCGGTGCCTTTGCTGGCCAGAGTCTC TGGCGTCAGTGCCACCATTGCCGAAAACATCGTGGCACACCGGGACAGTCACGGAAGGTTCGGTTCGCGCACGGCGCTGA AGGACATACCGAGGCTCGGTCCGAAAGCGTTCGAGCAGTGCGCGGGGTTCCTCCGCATCGTTGACGGTGATGACCCGCTC GACGCGAGCGCCGTGCACCCGGAGGCGTACCCAGTGGTTCGCCGGATTGTCAGTTCGTGTGGGCTGCGCGTGCGGGAACT GATCGGCAACTCGCAGGTGCTGGGCGGACTGCGGCCCAGCGACTTCACCGATGACACCTTCGGAGTCCCTACGGTGAGTG ACATTCTTGCTGAGCTCGACAAACCTGGCCGTGACCCACGCCCGGAGTTCCGTGCCGCCCAGTTCGCGGAAGGTGTTGAG CGTGTCAGCGACCTCAAGCCAGGGATGGTTCTGGAGGGTGTAGTCACAAACGTCGCAGCTTTCGGTGCGTTCGTTGACGT AGGGGTGCACCAGGATGGGCTCGTGCACGTTTCGGCGATGTCGTCACGCTTTGTATCGGATCCGCGCGAGATCGTGAAGA GCGGTGACATCGTCAAGGTGAAGGTCGTGACAGTAGACGTTGACCGTAAGCGAATCGGGTTGACGCTGCGACTCGACGAC GAGACGGCTGGCAGCGGCTCGGACCAGCCGCGTCGTGAAGGGCGGCCCCCCAAGAAGCAGCCTCCGAAGAGGCAGCCGCC CAAGAATCAGCAACTAGGCAAGTCACCGAAACAGCAAGCGAAAGGCGAGCGGAGTCAAGGCGGTGGTAGCACCGCATCCG GTTCCCTTGCCGACGCATTACGGCGCGCGGGTTACTCCAAGTAG Protein sequence : MTDRIAEELNVAQWRVAAAIALLDGGSTVPFVARYRKEATGGLDDAELRQLEERLRYLRELDERRSAIIASIKQQGKLDD GIEAQLVGAETKSRLEDIYLPFKPKRRTKAQIAREAGLEPLAERLLSDPSHDPASVATKFVDEEKGVADAAAALDGARAI LIERVSEDADLVGELRELMWRRGRIVSSARKGKEAEGAKFADYFDFAEPFSSLPSHRVLALLRGEKEEFLSVQFDPEPDA EGPPGPSLYEQKIAVALGVRDQGRPGDRWLADTVRWAWKTKLQVSSSIDVRARLRQAAEADAVDVFARNVRDLLLSAPAG PRITMGLDPAYRTGVKVAVVDGTGKLLETATVYPHKPQSQWDAALGALAELVTRHNVDLVAIGNGTASRETDALAAELLK RMPETKLTKMVVSEAGASVYSASEYGSRELPDLDVSLRGAVSIARRLQDPLAELVKIDPKSLGVGQYQHDIAEGLLARSL DAIVEDAVNAVGVDVNTASVPLLARVSGVSATIAENIVAHRDSHGRFGSRTALKDIPRLGPKAFEQCAGFLRIVDGDDPL DASAVHPEAYPVVRRIVSSCGLRVRELIGNSQVLGGLRPSDFTDDTFGVPTVSDILAELDKPGRDPRPEFRAAQFAEGVE RVSDLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSSRFVSDPREIVKSGDIVKVKVVTVDVDRKRIGLTLRLDD ETAGSGSDQPRREGRPPKKQPPKRQPPKNQQLGKSPKQQAKGERSQGGGSTASGSLADALRRAGYSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 8e-178 | 60 |
