Gene Information

Name : AS9A_0135 (AS9A_0135)
Accession : YP_004491395.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : -
Position : 142856 - 144475 bp
Length : 1620 bp
Strand : -
Note : -

DNA sequence : 
GTGCCTGATCACATTCCGTTTCCAGCCGAATTCGCCGCGCGATACCGCGCCGCCGGGTACTGGACGACCGAAACATTCCA
GGAATTCCTGCCGCGCCGCGCGGACCGCTTTGCAGATCACATCGCGGTCATCGGACGGGACGCCACAGGCGCCAACCGGG
CCCTGAGCTACCTGGAACTCACCACGTCGGCCGAGCGGATCGCCGGGGGATTCGGTCGGCTAGGTATCCGTACCGGTGAC
CGTGTGGTCGTTCAACTCCCCAACATCGTGGAGTTCATGGAGGTCGTGTTCGCGCTGTTCCGGCTCGGTGCGCTGCCCGT
GTTCGCGCTGCCCGCACACCGCAGCGCGGAGATCGGCTTCTTTTGTGAATTCGCGGCGGCGAAGGCATATGTGATCGCTG
ATCAGCATGGCGGGTTCGACTATCGCGGGATTGCCCGGACCCTGCCGTCCACGCCGCACGTCATCGTTGCTGGGGACGCA
GGCGACTTCCTCGCGCTTTCCGGCGTTCGGGCCACTGGGCCCTCAGATGTCACACATGTCGACGCGGAAACGGTCGCGTT
CCTGCAATTGTCGGGCGGCACTACCGGCACACCCAAGCTGATACCGCGAACACACGCCGACTATCTGTACTCAGTGCGGG
AATCGGCCGCGATCTGTGGCGTGAGCAGCGCGACACGGATGCTTGTGGTCCTGCCCGCCGCACACAACTTCCCGATGAGT
TCACCCGGATTTCTCGGCGTGCTGCATGCGGGCGGCACTGTGGTGCTCGCACCAGATCCGAGTCCTTCCACCGCCTTCTC
GATGATCGAGCGCCACCGCATCACAATGACCTCGCTCGTGCCACCGCTCGCACTCACATGGCTCGCAGCGCGCAAGAACA
GCAGCGCCGATCTGTCGTCGCTCGGGGTATTGCAGGTGGGTGGCGCGAAGTTCACCGAAGAAGCAGCGCGCCGGGTCACA
CCAGAATTGGGCTGTACGCTGCAGCAGGTATTCGGGATGGCGGAAGGCCTCGTGAACTACACGCGGCTTGACGACCCCGA
AGACGTGATAGTCACAACACAGGGCCGCCCGATCAGCCCGGATGACGAGGTTCGCGTTGTCGACGACGCCGGTTGCGACG
TCCGCGCCGGTGAGGTGGGCCATCTCCTGACCCGCGGTCCCTATACGATCCGCGGCTACTACAACGCCGCCGAGCACAAT
AAGACGGCATTCACCGAGGACGGCTTCTACCGCACCGGTGACATTGTGCGCCTCACCGAATCTGGCTACCTCGTTGTCGA
GGGACGAAGCAAAGACCAGATCAACCGGGGTGGCGAGAAGATCGCCGCCGAAGAGGTTGAGAACCACCTCGTCGCGCATC
CCAACGTGCTCGACGCCGCGATCGTCGCCATTCCTGACGCCTACCTCGGAGAACGCACCTGCGCGTTCGTCGTCGCAGAC
GGCGAACCACCGAACCCGATCGCACTCAAATCATTCCTGCGCGGCCGTGGACTTGCCGGCTACAAGGTGCCTGACCTCGT
ACAGGTCGTGCCGGAATTCCCGGTCACCGGTGTCGGGAAGATCAGCCGCGCCGACCTTCGCCGCGCCCTGACTCGCAGCT
GGGAGAAAGTGAAATCCTGA

Protein sequence : 
MPDHIPFPAEFAARYRAAGYWTTETFQEFLPRRADRFADHIAVIGRDATGANRALSYLELTTSAERIAGGFGRLGIRTGD
RVVVQLPNIVEFMEVVFALFRLGALPVFALPAHRSAEIGFFCEFAAAKAYVIADQHGGFDYRGIARTLPSTPHVIVAGDA
GDFLALSGVRATGPSDVTHVDAETVAFLQLSGGTTGTPKLIPRTHADYLYSVRESAAICGVSSATRMLVVLPAAHNFPMS
SPGFLGVLHAGGTVVLAPDPSPSTAFSMIERHRITMTSLVPPLALTWLAARKNSSADLSSLGVLQVGGAKFTEEAARRVT
PELGCTLQQVFGMAEGLVNYTRLDDPEDVIVTTQGRPISPDDEVRVVDDAGCDVRAGEVGHLLTRGPYTIRGYYNAAEHN
KTAFTEDGFYRTGDIVRLTESGYLVVEGRSKDQINRGGEKIAAEEVENHLVAHPNVLDAAIVAIPDAYLGERTCAFVVAD
GEPPNPIALKSFLRGRGLAGYKVPDLVQVVPEFPVTGVGKISRADLRRALTRSWEKVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 4e-109 49
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 6e-109 49
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 7e-110 49
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 7e-110 49
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 7e-110 49
ybtE CAA21394.1 - Virulence HPI Protein 7e-110 49
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 5e-110 49
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 5e-110 49
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 7e-110 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_0135 YP_004491395.1 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 5e-130 54
AS9A_0135 YP_004491395.1 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 2e-115 49
AS9A_0135 YP_004491395.1 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 7e-112 48