Gene Information

Name : AS9A_1236 (AS9A_1236)
Accession : YP_004492488.1
Strain : Amycolicicoccus subflavus DQS3-9A1
Genome accession: NC_015564
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1282640 - 1283341 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGACAACATCTAAGTCTCCAATCCTCACGGCCCGCAACATTGTCAAACAATTCGGTTCGGCACCGGTCCTGCAGAA
CGCCTCACTCGACATTTACCCAGGCCGTGCGATCGCGATCATGGGCCCGTCAGGATCGGGTAAATCCACGCTGCTGCACA
TCCTCAGCGGAATTCTGCAGCCCGACTCCGGCGAGGTTCTCTTCAGTGGCCGGGCAATTCAGGCCCTAAAAGAAGCAGAA
CGCACAGCGCTGCGCCGATCATCCTTCGGGTTCGTTTTTCAGTCGGGGCAACTTTTACCCGAGCTTCCCGCACTTGAAAA
CGTGGCACTCCCCCTCATCCTCGGTGGCGCGAAGGTCGATGCAGCCAAGCAGCAAGCTGCCGGGTATTTCTCTCCGCTTG
GACTCGCTGGGCTCGAGAACCGCCGTCCCGGTGAGATGTCCGGTGGCCAAGCGCAGCGTGTCGCGATCGCGCGGGCACTG
GTCACGCGGCCCGCGGTGCTGTTCGCAGATGAACCCACAGGCGCGCTGGACGCGCACACCAGCCACGAGGTGATGACGCT
TCTCTGCGAAGCGAGCCGCCATACGGGTGCCGCGCTCGTTGTCGTGACGCACGACCCTGAAGTGGCACATTCTTGTGACT
CGACGGTCCATGTACGTGAAGGGCAATTAACCGCCCCAATCGCGAAGGGAGAAACCTGGTGA

Protein sequence : 
MQTTSKSPILTARNIVKQFGSAPVLQNASLDIYPGRAIAIMGPSGSGKSTLLHILSGILQPDSGEVLFSGRAIQALKEAE
RTALRRSSFGFVFQSGQLLPELPALENVALPLILGGAKVDAAKQQAAGYFSPLGLAGLENRRPGEMSGGQAQRVAIARAL
VTRPAVLFADEPTGALDAHTSHEVMTLLCEASRHTGAALVVVTHDPEVAHSCDSTVHVREGQLTAPIAKGETW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1236 YP_004492488.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AS9A_1236 YP_004492488.1 putative ABC transporter ATP-binding protein VFG2059 Protein 4e-18 41