Gene Information

Name : DelCs14_0980 (DelCs14_0980)
Accession : YP_004486371.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1113785 - 1114876 bp
Length : 1092 bp
Strand : +
Note : PFAM: Bacterial transport system permease protein; KEGG: pfl:PFL_3501 heme/hemin ABC transporter, permease protein

DNA sequence :
ATGAGCGCGGCCATGGAGGCCAGTGCCGTGGCGGCAGAGACGGGCGCTGCGGCGGCCGGTGCCGCGCAGCGCTACCGCCG
CCGCCATGCCCGCCACGGGCTGGTGCTGGCGCTGCTGGCCCTGGCGCTGCTGGCCAGCCTGGCACTGGACGTGGCCACCG
GCCCGTCGGGCATGGGGCTGGCACGGCTGTGGCAGGTGCTCGGCGATCCGGGCAGCGTGTCGCGCGTGGAGGCCGTCATC
GTCTGGAACGTGCGCCTGCCCTATGCGCTGATGGCCGTGCTGGTGGGTGCGGCGCTGGCGCTGGCTGGCGCGGAGATGCA
GACCGTGCTGGCCAATGCGCTGGCCAGCCCGTTCACGCTGGGCGTGTCGGCGGCCGCCGCCTTTGGCGCGGCCCTGGCCA
TCGTGCTGGGACTGGGCGTGCCGGGCGTGCCGGCGCAGTACGTGGTGTCTCTCAACGCCTTCCTCTTCGCGCTGCTGTCG
GTGGGCCTGCTGTACGGGCTGGCCATGTGGCGCGGATTTGGCGTGCAAAGCCTGGTGCTGTTCGGCATCGCCCTGGTGTT
CAGCTTCAACGCCCTGGTGGCACTGCTGCAGTTCGTGGCCGACCAGAACACCTTGCAGCAGCTGGTCTTCTGGACCCTGG
GCAGCCTGGCACGCGCCTCCTGGGACCGGATTGCCGTCATGGCCGCCGTGTTGGCGCTGTGCCTGCCCTGGTCCTGGAGC
CAGAGCTGGTCGCTGACCGCGCTCACGCTGGGCGAGGACCGCGCGTGCAGCCTGGGCGTGCCGGTCACGGCGCTGAGAGG
CTGGGCGCTGCTGCGCATCAGCCTGCTGTCGGGCGTGGCCGTCTCCTTCGTGGGCACCATAGGATTCGTGGGGCTGATCG
CACCGCACATCGCGCGCATGCTGGTGGGCGACGATCACCGCGTGCTGCTGCCGGCCTCGGCGCTGGCGGGGGCACTGATC
CTGTCCATGGCCTCGGTGGCCAGCAAGACGCTGATCGAGGGCGTGCTGGTGCCCGTGGGCATCGTGACCTCGCTGGTGGG
CATTCCCTTTTTCATGGCCATCGTTGCCCGCACGGGCCGGCAGGAGCGCTGA

Protein sequence :
MSAAMEASAVAAETGAAAAGAAQRYRRRHARHGLVLALLALALLASLALDVATGPSGMGLARLWQVLGDPGSVSRVEAVI
VWNVRLPYALMAVLVGAALALAGAEMQTVLANALASPFTLGVSAAAAFGAALAIVLGLGVPGVPAQYVVSLNAFLFALLS
VGLLYGLAMWRGFGVQSLVLFGIALVFSFNALVALLQFVADQNTLQQLVFWTLGSLARASWDRIAVMAAVLALCLPWSWS
QSWSLTALTLGEDRACSLGVPVTALRGWALLRISLLSGVAVSFVGTIGFVGLIAPHIARMLVGDDHRVLLPASALAGALI
LSMASVASKTLIEGVLVPVGIVTSLVGIPFFMAIVARTGRQER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 2e-57 64
irp6B YP_005124376.1 membrane protein permease Irp6B Virulence Not named Protein 3e-41 46
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 4e-43 46