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Name : DelCs14_0903 (DelCs14_0903) Accession : YP_004486294.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1027452 - 1028813 bp Length : 1362 bp Strand : - Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: dac:Daci_5698 general secretory pathway protein E; SMART: ATPase, AAA+ type, core DNA sequence : ATGCGCTATCCCCTGCCCTATTCGTTTGCGCGCACCAGCCAGCTGCTGATCGAGGACGACGGCCACGAGCCCCTGCTCTG GCACGGCCCCTCGCCCGACTGGCAGGCCCTGTCCGAAGTCCAGCGCAAGCATGCGGTGCAGCGCTGGCAGATGCTGGATG CGGGCACGCTGGCGCACCGCATCAGCGCCGCCTATTCGCAGGGCGAGTCCAGCGCGGCCCTGGTGGTCAGCGAGGTCGAG TCCGACGCCGACCTCTCGCGCATGATGCAGGAGCTGCCCGCCGTCGAGGACTTGCTGGAGACTGCGGACGACGCGCCCAT CATCCGCATGCTCAACGCCCTGCTCACGCAGGCCGCGCGCGACGGCGCCAGCGATATCCACATCGAGCCCTATGAGCGCC ACTCCAGCGTGCGCTTTCGCGTGGACGGCGACCTGCGCGAGGTCGTGCAGCCCAACCGGGCCCTGCACGCGGCGCTGATC TCGCGCCTGAAGATCATGGCCGACCTGGACATCGCCGAAAAGCGGCTGCCCCAGGACGGCCGCATCAGCCTGCGCCTGGG CACGCGCGCCATCGACGTGCGCGTCTCCACCCTGCCCAGCGCCCACGGCGAGCGCGCCGTGCTGCGCCTGCTGGACAAGA GCGAGAGCAAGCTCAGTCTGGAGGCCGTTGGCATGCAGGGCGAGACGCTGAGGCGATTCACCCACATGACGGCCCAGCCC CACGGCATCGTGCTGGTCACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCGGCGCTGTCGCGCATGGACGC CAGCCACAGCAACATCATGACGGTGGAAGACCCCATCGAGTACGAGCTGGCCGGCGTGGGGCAGACCCAGGTCAACGCCA AGATCGAGCTGACCTTCGCCAAGGCCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGC GACTTCGAGACCGCGCAGATCGCCATCCAGGCCTCGCTGACGGGCCACCTGGTGCTGGCCACGCTGCACACCAACGATGC ATCCAGCGCCGTCACCCGCCTGATCGACATGGGCGTGGAGCCGTTCCTGCTGTCGTCCTCCCTGCTGGGCGTGCTGGCCC AGCGCCTGGTGCGCAAGATCGACACCACCGAGCCCAGTGGCTACCGAGGGCGCACCGGCATCTTCGAGATGCTGGTGGTG GACGACACCATCCGCGCGCAGATCCACCGCCAGGCCAGCGAGGCCGAGATCCGCGACACCGCGCTGGCCTCGGGCATGCG CCTGATGCGCGACGACGGCGAGCGGCTGGTGCGCGAGGGCATCACCACGCCCGAGGAAGTGCTGCGCGTCACGCGCGACT AG Protein sequence : MRYPLPYSFARTSQLLIEDDGHEPLLWHGPSPDWQALSEVQRKHAVQRWQMLDAGTLAHRISAAYSQGESSAALVVSEVE SDADLSRMMQELPAVEDLLETADDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGDLREVVQPNRALHAALI SRLKIMADLDIAEKRLPQDGRISLRLGTRAIDVRVSTLPSAHGERAVLRLLDKSESKLSLEAVGMQGETLRRFTHMTAQP HGIVLVTGPTGSGKTTTLYAALSRMDASHSNIMTVEDPIEYELAGVGQTQVNAKIELTFAKALRAILRQDPDVIMIGEIR DFETAQIAIQASLTGHLVLATLHTNDASSAVTRLIDMGVEPFLLSSSLLGVLAQRLVRKIDTTEPSGYRGRTGIFEMLVV DDTIRAQIHRQASEAEIRDTALASGMRLMRDDGERLVREGITTPEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-88 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-88 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DelCs14_0903 | YP_004486294.1 | general secretory pathway protein E | VFG0182 | Protein | 7e-101 | 53 |
| DelCs14_0903 | YP_004486294.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-100 | 51 |
| DelCs14_0903 | YP_004486294.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-89 | 49 |
| DelCs14_0903 | YP_004486294.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-58 | 45 |
