Gene Information

Name : DelCs14_0676 (DelCs14_0676)
Accession : YP_004486067.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 771582 - 772325 bp
Length : 744 bp
Strand : +
Note : KEGG: dac:Daci_5920 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence :
ATGAGCACGCCCGCCAACCGCATCCTGATGATCGAGGACGACCCCGGCATCCGCCGCTTCGTGCGCCTGGTGCTGGAAGA
CGAAGGCTGGCTGGTCTTCGAGGCCGACAGCGCGCGCCGCGGCCTGATCGAGGCCGCCAGCCGCCAGCCCGACCTGGTCA
TCCTCGACCTGGGCCTGCCGGACGCCGATGGCAAGCAGGTCCTGACCGAGCTGCGCGGGTGGTCCTCCGTGCCCGTGCTC
GTGCTCTCCGCGCGCGAGCGTGAGGACGAGAAGGTGGCCGCATTGGATGCCGGCGCCGACGACTACCTGGTCAAGCCCTT
CGGCGTGCCCGAGCTGCTGGCCCGGCTGCGCGTGATGCTGCGCCGCCGCCAGCAGCTGGGCGCTGCCGGTGGGGCGGGCG
GCACCGCCGCGTCCAGCAAGGTGCACTTCGGCCCGGTGCAGGTGGACCTGGCCACGCATGAGGTGCGGCGCGCGGGGCAG
CCGGTGCACCTCACGCCCATCGAATTCCGCCTGCTGGCGGCCCTGATCGCCGCCCAGGGCCGTGTGATGACCCACCGCCA
GCTGCTGCTGCAGGTCTGGGGCCCCGAGTACCTGGGCCGCGCCCACTACCTGCGCGTGCACATGGCCAATCTGCGCCAGA
AGATCGAGGACGAGCCGGCCCAGCCGCGCCACCTGGTGACCGAGCTGCAGGTGGGCTACCGGCTTGTGGGGCTGGGCGGT
GAGGCATCCCCGGGATCGGTATAA

Protein sequence :
MSTPANRILMIEDDPGIRRFVRLVLEDEGWLVFEADSARRGLIEAASRQPDLVILDLGLPDADGKQVLTELRGWSSVPVL
VLSAREREDEKVAALDAGADDYLVKPFGVPELLARLRVMLRRRQQLGAAGGAGGTAASSKVHFGPVQVDLATHEVRRAGQ
PVHLTPIEFRLLAALIAAQGRVMTHRQLLLQVWGPEYLGRAHYLRVHMANLRQKIEDEPAQPRHLVTELQVGYRLVGLGG
EASPGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-32 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_0676 YP_004486067.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-22 41
DelCs14_0676 YP_004486067.1 winged helix family two component transcriptional regulator VFG1389 Protein 4e-20 41