Gene Information

Name : DelCs14_0673 (DelCs14_0673)
Accession : YP_004486064.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.4
Position : 765784 - 767868 bp
Length : 2085 bp
Strand : +
Note : PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: dac:Daci_5923

DNA sequence :
ATGTCGCGCAAAACTGCTTTGTCCCTGTTCGATCCTTCGCTGGTGCGCCAGGCGCTGGGTGACTCCATCCGCAAGCTGGC
ACCCAGCGCGCAATGGCGCAACCCGGTGATGTTCGTGGTCTACCTGGGCGCCATCTTCACCAGCCTGCTCTGGGCCCAGG
CCCTGGCGGGGGAAGGCGAAGCGCCTGCGGGCTTCATCCTGGCGATTGCGCTGTGGCTGTGGTTCACCGTGCTGTTCGCC
AACTTTGCGGAGGCGCTGGCCGAGGGGCGCAGCCGCGCCCAGGCCGCCAGCCTGCGCAGCATGAAGCGCAGCACCGTCGC
CAAGAAGCTGGAGCAGGCCAACTACCAGAGCCGCTGGCATCCCGTGGGTGCCGAAGAACTGCGTTCGGGCATGTGGGTGC
TGGTGGAGGCCGGCGACACCGTGCCGCTGGACGGCACCGTGATCGAGGGCGTGGCCTCGGTGGACGAGAGCGCCATCACC
GGCGAATCGGCCCCCGTGATCCGCGAGGCCGGTGGTGACTTCTCTTCGGTCACGGGCGGCACGCGCGTGCTGTCGGACTG
GCTGGTGGTGCAGATCACCGTCAATCCCGGTGAGTCCTTCCTCGATCGCATGATCTCCATGGTGGAGTCGGCCCGCCGCC
ACAAGACGCCCAACGAGCTGGCGCTGACCATTTTGCTGGTCGGGCTGACGCTGCTGTTCCTGTTGGTCATCGTTACGCTG
CGGCCCTATTCGTCCTTTGCGGTGGAGCTGACGGGCAGCGGCCAGGTCGTGGGCCTGACGGTGCTGGTGGCGCTGCTGGT
GTGCCTGATCCCGACCACCATCGGCGGCCTGCTGTCGGCCATTGGCGTGGCGGGCATGAGCCGCATGATGCAGGCCAACG
TGATCGCCACCTCGGGCCGCGCCGTGGAGGCGGCCGGCGACGTGGACGTGCTGCTGCTGGACAAGACCGGCACCATCACT
CTGGGCAACCGCCAGGCCAGCGAGTTCCTGCCCGCGCCCGGCGTGACGGCCGCGCAGCTGGTGGATGCGGCGCAGCTGGC
CTCGCTGGCCGACGAGACGCCTGAAGGCCGCAGCGTGGTCGTGCTGGCCAAGGAGATGCATGGCCTGCGCGAGCGCGACC
TGGCCACGCTGCATGCGGTCTTCGTGCCCTTCACGGCCCAGACGCGCATGAGCGGCGTGGACATGCCCCAGCCGGACGGC
GCCACGCGCAGCCTGCGCAAGGGCGCGGCCGACGCCGTGCGCCGCCACGTTGAATCCCTGGGCGGCCAGTTCCCGCCCGC
CATGCTCAAGGTGGTGGAGGATGTGTCACGGCGCGGCAGCACGCCGCTGGTCGTGGCCGACGGTGCCCGCGTGCTGGGCG
TGATCGAGCTCAAGGACGTGGTCAAGCACGGCATACGCGAACGCTTTGCCGAGCTGCGCCGCATGGGCATCAAGACCGTG
ATGATCACGGGCGACAACCCGCTCACGGCGGCCGCCATTGCGGCCGAGGCCGGCGTGGACGACTACCTGGCCGAAGCCAC
GCCCGAGGACAAGCTGCGCCTGATCCGCGAACACCAGGCCGCAGGCCGCTTGGTGGCCATGACCGGCGATGGCACCAATG
ACGCGCCCGCCCTGGCCCAGGCCGACGTGGCCGTGGCCATGAACAGCGGCACCCAGGCGGCCAAGGAGGCCGGCAACATG
GTGGACCTGGACAGCAACCCGACCAAGCTCATCGAGGTCGTGGAGACCGGCAAGCAGATGCTGATGACGCGCGGCGCGCT
GACCACCTTCAGCGTGGCCAACGACGTGGCCAAGTACTTCGCCATCATCCCGGCCGCCTTCGTGGGCACCTATCCGCAGC
TGTCGGCGCTCAACGTCATGGGGCTGGCCAGCCCGGGCTCGGCCATCCTGAGTGCCGTGATCTTCAACGCGCTGATCATC
ATCGTGCTGATCCCGCTGGCCCTGCGTGGCGTGCCCTACCGCGCCATTGGCGCCTCTGCCCTGCTGAGGCGCAACCTGCT
GATCTACGGCCTGGGTGGCCTGGTCGTTCCCTTCATCGGCATCAAGCTGATCGACATGCTGCTGGTAGCTCTGAACCTGG
CGTGA

Protein sequence :
MSRKTALSLFDPSLVRQALGDSIRKLAPSAQWRNPVMFVVYLGAIFTSLLWAQALAGEGEAPAGFILAIALWLWFTVLFA
NFAEALAEGRSRAQAASLRSMKRSTVAKKLEQANYQSRWHPVGAEELRSGMWVLVEAGDTVPLDGTVIEGVASVDESAIT
GESAPVIREAGGDFSSVTGGTRVLSDWLVVQITVNPGESFLDRMISMVESARRHKTPNELALTILLVGLTLLFLLVIVTL
RPYSSFAVELTGSGQVVGLTVLVALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTIT
LGNRQASEFLPAPGVTAAQLVDAAQLASLADETPEGRSVVVLAKEMHGLRERDLATLHAVFVPFTAQTRMSGVDMPQPDG
ATRSLRKGAADAVRRHVESLGGQFPPAMLKVVEDVSRRGSTPLVVADGARVLGVIELKDVVKHGIRERFAELRRMGIKTV
MITGDNPLTAAAIAAEAGVDDYLAEATPEDKLRLIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNM
VDLDSNPTKLIEVVETGKQMLMTRGALTTFSVANDVAKYFAIIPAAFVGTYPQLSALNVMGLASPGSAILSAVIFNALII
IVLIPLALRGVPYRAIGASALLRRNLLIYGLGGLVVPFIGIKLIDMLLVALNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 8e-165 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 6e-165 61
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-136 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-135 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-135 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-135 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-135 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-135 55