Gene Information

Name : DelCs14_0665 (DelCs14_0665)
Accession : YP_004486057.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 757141 - 757854 bp
Length : 714 bp
Strand : -
Note : KEGG: aav:Aave_4118 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core

DNA sequence :
ATGTGCCGTGTTCTAGGCGTATCCGCCAGCGGTTTCTACGCTTGGCGAGAGCGCAGGTCTTCCCAGCGCAGCATCACCAA
CGCGGTAATGACCGAACGAATACGCCAGATTCACAAGGACTCATACGAGTCCTACGGCATGCCGCGCGTGAGGGCCGAGC
TCATCGAGCAAGGCGTCTCCATCAGCCGACAGCGTGTTGCGCGCCTCATGCGTCTGGCCCGCATCCAGTGCATCAGCCGC
CGCCGTGGCTTCATGATTACCACGCGCCAAGACAAACGTGTCTCACCCGCCAACGACCTGGTCAAGCGCCAGTTCAAGTC
CAGCGGTCCCAATCAACTCTGGGTGGCCGACATGACCTACGCGCCCACCTGGACGAGGTTCTTTTACTTGGCCGTGGTCA
TCAACGTGTGGCGTGTGGTGGGTTGGTCTATGGGCGAGAGAATGACGACCGACCTTGTGCTATCGGCGCTCAACATGGCG
CTGACCCAGCGCAAGCCGCAAGACGTCATCCACCATAGTGACCAGGGCAGCCAATACACCAGCTTGGCCTTCAGCGAGCG
CCGCCGCCAGATGGGTGTCGCCCCTCAATGGACTGTGGGAGATGCCTATGACAACGCGATGGCTGAGAGCTTCTTCGCCA
GCCTGGAGGCTGAACTCATTGAGCGTCACAGCTTTGAGTCAAAGGCTCAGGCCCGCATGACCGTCTTCACTTGA

Protein sequence :
MCRVLGVSASGFYAWRERRSSQRSITNAVMTERIRQIHKDSYESYGMPRVRAELIEQGVSISRQRVARLMRLARIQCISR
RRGFMITTRQDKRVSPANDLVKRQFKSSGPNQLWVADMTYAPTWTRFFYLAVVINVWRVVGWSMGERMTTDLVLSALNMA
LTQRKPQDVIHHSDQGSQYTSLAFSERRRQMGVAPQWTVGDAYDNAMAESFFASLEAELIERHSFESKAQARMTVFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-25 43
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 7e-31 42
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-24 41