Gene Information

Name : DelCs14_5811 (DelCs14_5811)
Accession : YP_004491135.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6536492 - 6537184 bp
Length : 693 bp
Strand : -
Note : KEGG: dac:Daci_0726 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduc

DNA sequence : 
ATGAAGATCCTGATCGTGGATGCCCACCCGCCGTCGGCGCAGTACCTGTGCCAGGGCCTGTGCCAGGACGGATTCAACGT
CGATGTCGTGCATGACGGTCTGCAGGGCCGCAACCTGGCACTGAGCCGCGCCTACAGCCTGCTCGTGCTGGATCTGGACC
TGCCTGGCCAGAGCGGGCGTGCGGTCCTGCAGACCCTGCTCCAGGCGGGCGACACGCCCACCATCGTGGTCACCGCAAAC
GACAGTCTGGAGGACCAGGTGTTCTGCCTGCAGAACGGCGCCGATGACTACCTGGTCAAACCCGTCAGGTTGCCGGTGTT
CCTGGCCCGTGCACGGCTGCGGATGCGAGGCTCTGCCGGCCAGGAGGGCCTGCGCCTGACATTGGCGGACCTGGTGCTGG
ACCTGTCGAAAAAGCGGGTCGAGCGTGCCGGCCGGCGACTGGACCTCACTCGCCAGGAATTCGCCGTGCTGTGGCTGCTG
CTGCAGCGCCAGGGCGATGTGGTCACGCGCGCCGAACTGGTGCAGCAGGTCTGGAGCCTGCCCGTCGATGCGCTGAACAA
CGTGGTGGATGTGGCGGTGTGCAGGCTGCGCAGCAAGCTCGATGATCCCTATGCGGTCAAGCTGCTGCACACGGTGCGCG
GCATGGGCTACCTGCTGGCGTTGCGCGACGGGGATCCGGCCAAGCAGCCCTGA

Protein sequence : 
MKILIVDAHPPSAQYLCQGLCQDGFNVDVVHDGLQGRNLALSRAYSLLVLDLDLPGQSGRAVLQTLLQAGDTPTIVVTAN
DSLEDQVFCLQNGADDYLVKPVRLPVFLARARLRMRGSAGQEGLRLTLADLVLDLSKKRVERAGRRLDLTRQEFAVLWLL
LQRQGDVVTRAELVQQVWSLPVDALNNVVDVAVCRLRSKLDDPYAVKLLHTVRGMGYLLALRDGDPAKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-35 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator BAC0083 Protein 6e-36 47
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-29 46
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator BAC0197 Protein 7e-39 45
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-37 45
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator BAC0111 Protein 6e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_5811 YP_004491135.1 winged helix family two component transcriptional regulator VFG0596 Protein 3e-35 46