Gene Information

Name : DelCs14_5511 (DelCs14_5511)
Accession : YP_004490836.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 6204148 - 6206382 bp
Length : 2235 bp
Strand : -
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: dac:Daci_1011 ATP-dependent DNA helicase RecG; SMART: DEAD-like heli

DNA sequence :
ATGCCCTTGAACGTCTCCTCTGCCTTCCCAGATCTGGGGCGCGACGCCCCCGGCGGCAAGGCCGCGCGTTCCGGCAAGGG
AAAGGCCGCAGGCAAGGGCGGCAAGGCAGCGGAGAAAGCAGGAGACAAGCCCGCAGCGCCCGCCAAGCCCGCAGCCAGCG
CCGCGCAGAAGGCGCTGCAGAAGATGGGCCTGGTGCGCGACATCGATCTGGCACTGCACCTGCCGCTGCGCTATGAGGAC
GAGACGCGCATCACCGCGCTGCGCAATGCCCGCGAGGGCGACACGGTGCAAATCGAGGCCACGGTGACCCACAGCGAGGT
GCAACTGCGCCCGCGCCGCATGCTCAAGGTCACGGTGGACGATGGCACGGCCGAATGCGTGCTGACCTTCTTCAGCTTCT
ACCCCTCGCACCAGAAGACCCTGTCCGTGGGCGCGCGGCTGCGCATCCGCGGCGAGGTCAAGGGCGGCTTCTGGGGCCGG
CAGATGCTGCACCCGGCGTTTCGCGCGGCGGGCGGCGACCTGCCCACGGCGCTCACGCCCGTCTATCCCACGGTGGCGGG
CCTGCCCCAGGCCTACATCCGCCGCGCGGCGGTCACGGCCATGCTGCGCGCCGATCTCTCCGATACGCTGCCCCAGGGCG
AGCATCCGCCCGTGGCGCAGTTCCATGGCAACGGCGGGCTGCCGCCGCTGTTCAGCCTGCGCGATGCGCTGCAGTTCCTG
CACCACCCCACGCCCGATGTGGCCCTGGCCACGCTGGAAGACCATTCGCACCCGGCCTGGCAGCGCCTGAAGGCCGAGGA
GCTGCTGGCCCAGCAACTGTCCCAATACGAGGCCAAGCGCGAACGCGCGCGGCTCAGGGCGCCCGTGCTGCGCGCCCAGC
CCATGGACAGCGCCCAGGGCCTGGCGCGCCAGTTCCTGGACCAATTGCCCTTTGGCCTGACCGGCGCCCAGCAGCGCGTG
GTGGCCGAGATCCTTGCCGACATGGAGCGCCGCATGCCCATGCACCGGCTGCTGCAGGGCGATGTGGGATCGGGCAAGAC
CGTGGTGGCGGCGCTGTCGGCCGTGGCCTGCATCGAGGCCGGCTGGCAGTGCGCGCTGATGGCGCCCACCGAAATCCTGG
CCGAGCAGCATTTCGGCAAGCTGGTCGGCTGGCTGGAGCCGCTGCTGGCCCCGCTGGGCAAGCGCGTGGCCTGGCTGGCC
GGCGCACAGAAGAAGAAGGAACGCACCGCCATGCTGGAGCTGGTCCACAGCGGCGAGGCGGCCCTGGTCGTGGGCACGCA
CGCCGTCATCCAGGACCAGGTGCAGTTCAAGAACCTGGCGCTGGCCGTCATCGACGAGCAGCACCGCTTCGGCGTGGCCC
AGCGGCTGGCGCTGCGCCAGAAGCTCGCGGCCTCGGGCATGGAGCCCCATCTGCTGATGATGAGCGCCACGCCCATCCCG
CGCACCCTGGCCATGAGCTACTACGCCGACCTGGATGTGTCCACCATCGACGAGCTGCCGCCGGGCCGCACGCCCATCGT
CACCAAACTCATTGCCGACAGCCGCAAGGACGAGGTCATCGAGCGCATAGGTGCCCAGGTCGCGGAAGGGCGACAGGTCT
ACTGGGTCTGCCCGCTGATCGAGGAAAGCGAGGCGCTGGACCTGTCCAACGCCACGGCCACCCATGCCTATCTGAGCGAG
ATGCTGCCCGACGTCATGGTCGGCCTGCTGCACTCGCGCATGCCCACGGCCGAGAAGAAGGCCGTGATGGAGCTGTTCTC
CGCCGGGGTCATGGGCGTGCTGGTCTCCACCACGGTGATCGAAGTGGGCGTGGACGTGCCCAACGCCTCGCTCATGGTCA
TCGAGCATGCGGAGCGCTTCGGCCTGTCGCAGCTGCACCAGCTGCGCGGGCGCGTGGGGCGGGGTGCGGCGGCCTCGGCC
TGCGTGCTGCTGTATTCGGTGGGAGACAGTGGGCGCCTGGGCGAGACGGCCAAGGACCGGCTGCGTGCCATGGCCGAGAC
CAATGACGGCTTCGAGATCGCGCGGCGCGACCTGGAGATCCGCGGCCCCGGGGAATTCCTGGGCGCGCGCCAGTCGGGTG
CGCCCATGCTGCGCTTCGCCGACCTGGAGCAGGACCTGATGCTGCTCGACTGGGCCCGCGAGCTGGCGCCGCGCATGCTG
GAGCAGCACCCGCAACTGGCCCAGCGCCATGTGGGCCGCTGGCTGGGCGGCAAGGCCGAATTCCTCAAGGCCTGA

Protein sequence :
MPLNVSSAFPDLGRDAPGGKAARSGKGKAAGKGGKAAEKAGDKPAAPAKPAASAAQKALQKMGLVRDIDLALHLPLRYED
ETRITALRNAREGDTVQIEATVTHSEVQLRPRRMLKVTVDDGTAECVLTFFSFYPSHQKTLSVGARLRIRGEVKGGFWGR
QMLHPAFRAAGGDLPTALTPVYPTVAGLPQAYIRRAAVTAMLRADLSDTLPQGEHPPVAQFHGNGGLPPLFSLRDALQFL
HHPTPDVALATLEDHSHPAWQRLKAEELLAQQLSQYEAKRERARLRAPVLRAQPMDSAQGLARQFLDQLPFGLTGAQQRV
VAEILADMERRMPMHRLLQGDVGSGKTVVAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPLLAPLGKRVAWLA
GAQKKKERTAMLELVHSGEAALVVGTHAVIQDQVQFKNLALAVIDEQHRFGVAQRLALRQKLAASGMEPHLLMMSATPIP
RTLAMSYYADLDVSTIDELPPGRTPIVTKLIADSRKDEVIERIGAQVAEGRQVYWVCPLIEESEALDLSNATATHAYLSE
MLPDVMVGLLHSRMPTAEKKAVMELFSAGVMGVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASA
CVLLYSVGDSGRLGETAKDRLRAMAETNDGFEIARRDLEIRGPGEFLGARQSGAPMLRFADLEQDLMLLDWARELAPRML
EQHPQLAQRHVGRWLGGKAEFLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 8e-92 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_5511 YP_004490836.1 ATP-dependent DNA helicase RecG BAC0356 Protein 9e-123 50