Name : DelCs14_5511 (DelCs14_5511) Accession : YP_004490836.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 6204148 - 6206382 bp Length : 2235 bp Strand : - Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: dac:Daci_1011 ATP-dependent DNA helicase RecG; SMART: DEAD-like heli DNA sequence : ATGCCCTTGAACGTCTCCTCTGCCTTCCCAGATCTGGGGCGCGACGCCCCCGGCGGCAAGGCCGCGCGTTCCGGCAAGGG AAAGGCCGCAGGCAAGGGCGGCAAGGCAGCGGAGAAAGCAGGAGACAAGCCCGCAGCGCCCGCCAAGCCCGCAGCCAGCG CCGCGCAGAAGGCGCTGCAGAAGATGGGCCTGGTGCGCGACATCGATCTGGCACTGCACCTGCCGCTGCGCTATGAGGAC GAGACGCGCATCACCGCGCTGCGCAATGCCCGCGAGGGCGACACGGTGCAAATCGAGGCCACGGTGACCCACAGCGAGGT GCAACTGCGCCCGCGCCGCATGCTCAAGGTCACGGTGGACGATGGCACGGCCGAATGCGTGCTGACCTTCTTCAGCTTCT ACCCCTCGCACCAGAAGACCCTGTCCGTGGGCGCGCGGCTGCGCATCCGCGGCGAGGTCAAGGGCGGCTTCTGGGGCCGG CAGATGCTGCACCCGGCGTTTCGCGCGGCGGGCGGCGACCTGCCCACGGCGCTCACGCCCGTCTATCCCACGGTGGCGGG CCTGCCCCAGGCCTACATCCGCCGCGCGGCGGTCACGGCCATGCTGCGCGCCGATCTCTCCGATACGCTGCCCCAGGGCG AGCATCCGCCCGTGGCGCAGTTCCATGGCAACGGCGGGCTGCCGCCGCTGTTCAGCCTGCGCGATGCGCTGCAGTTCCTG CACCACCCCACGCCCGATGTGGCCCTGGCCACGCTGGAAGACCATTCGCACCCGGCCTGGCAGCGCCTGAAGGCCGAGGA GCTGCTGGCCCAGCAACTGTCCCAATACGAGGCCAAGCGCGAACGCGCGCGGCTCAGGGCGCCCGTGCTGCGCGCCCAGC CCATGGACAGCGCCCAGGGCCTGGCGCGCCAGTTCCTGGACCAATTGCCCTTTGGCCTGACCGGCGCCCAGCAGCGCGTG GTGGCCGAGATCCTTGCCGACATGGAGCGCCGCATGCCCATGCACCGGCTGCTGCAGGGCGATGTGGGATCGGGCAAGAC CGTGGTGGCGGCGCTGTCGGCCGTGGCCTGCATCGAGGCCGGCTGGCAGTGCGCGCTGATGGCGCCCACCGAAATCCTGG CCGAGCAGCATTTCGGCAAGCTGGTCGGCTGGCTGGAGCCGCTGCTGGCCCCGCTGGGCAAGCGCGTGGCCTGGCTGGCC GGCGCACAGAAGAAGAAGGAACGCACCGCCATGCTGGAGCTGGTCCACAGCGGCGAGGCGGCCCTGGTCGTGGGCACGCA CGCCGTCATCCAGGACCAGGTGCAGTTCAAGAACCTGGCGCTGGCCGTCATCGACGAGCAGCACCGCTTCGGCGTGGCCC AGCGGCTGGCGCTGCGCCAGAAGCTCGCGGCCTCGGGCATGGAGCCCCATCTGCTGATGATGAGCGCCACGCCCATCCCG CGCACCCTGGCCATGAGCTACTACGCCGACCTGGATGTGTCCACCATCGACGAGCTGCCGCCGGGCCGCACGCCCATCGT CACCAAACTCATTGCCGACAGCCGCAAGGACGAGGTCATCGAGCGCATAGGTGCCCAGGTCGCGGAAGGGCGACAGGTCT ACTGGGTCTGCCCGCTGATCGAGGAAAGCGAGGCGCTGGACCTGTCCAACGCCACGGCCACCCATGCCTATCTGAGCGAG ATGCTGCCCGACGTCATGGTCGGCCTGCTGCACTCGCGCATGCCCACGGCCGAGAAGAAGGCCGTGATGGAGCTGTTCTC CGCCGGGGTCATGGGCGTGCTGGTCTCCACCACGGTGATCGAAGTGGGCGTGGACGTGCCCAACGCCTCGCTCATGGTCA TCGAGCATGCGGAGCGCTTCGGCCTGTCGCAGCTGCACCAGCTGCGCGGGCGCGTGGGGCGGGGTGCGGCGGCCTCGGCC TGCGTGCTGCTGTATTCGGTGGGAGACAGTGGGCGCCTGGGCGAGACGGCCAAGGACCGGCTGCGTGCCATGGCCGAGAC CAATGACGGCTTCGAGATCGCGCGGCGCGACCTGGAGATCCGCGGCCCCGGGGAATTCCTGGGCGCGCGCCAGTCGGGTG CGCCCATGCTGCGCTTCGCCGACCTGGAGCAGGACCTGATGCTGCTCGACTGGGCCCGCGAGCTGGCGCCGCGCATGCTG GAGCAGCACCCGCAACTGGCCCAGCGCCATGTGGGCCGCTGGCTGGGCGGCAAGGCCGAATTCCTCAAGGCCTGA Protein sequence : MPLNVSSAFPDLGRDAPGGKAARSGKGKAAGKGGKAAEKAGDKPAAPAKPAASAAQKALQKMGLVRDIDLALHLPLRYED ETRITALRNAREGDTVQIEATVTHSEVQLRPRRMLKVTVDDGTAECVLTFFSFYPSHQKTLSVGARLRIRGEVKGGFWGR QMLHPAFRAAGGDLPTALTPVYPTVAGLPQAYIRRAAVTAMLRADLSDTLPQGEHPPVAQFHGNGGLPPLFSLRDALQFL HHPTPDVALATLEDHSHPAWQRLKAEELLAQQLSQYEAKRERARLRAPVLRAQPMDSAQGLARQFLDQLPFGLTGAQQRV VAEILADMERRMPMHRLLQGDVGSGKTVVAALSAVACIEAGWQCALMAPTEILAEQHFGKLVGWLEPLLAPLGKRVAWLA GAQKKKERTAMLELVHSGEAALVVGTHAVIQDQVQFKNLALAVIDEQHRFGVAQRLALRQKLAASGMEPHLLMMSATPIP RTLAMSYYADLDVSTIDELPPGRTPIVTKLIADSRKDEVIERIGAQVAEGRQVYWVCPLIEESEALDLSNATATHAYLSE MLPDVMVGLLHSRMPTAEKKAVMELFSAGVMGVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASA CVLLYSVGDSGRLGETAKDRLRAMAETNDGFEIARRDLEIRGPGEFLGARQSGAPMLRFADLEQDLMLLDWARELAPRML EQHPQLAQRHVGRWLGGKAEFLKA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 8e-92 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
DelCs14_5511 | YP_004490836.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 9e-123 | 50 |