Gene Information

Name : DelCs14_5467 (DelCs14_5467)
Accession : YP_004490792.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : nickel-transporting ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : 3.6.3.30
Position : 6165840 - 6167531 bp
Length : 1692 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: dac:Daci_1054 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGCGCCGCCATCGAGGAACGCATCCACGCCGCACCAGCGGTGGCAACCACCGCCCCCGTGCTCGAAGTGCAGGACCT
GGCCGTGGCCTACCGCGATGCCGCAGGCCAGGCGCAGCGCGTGGTGCACGGCGTGTCGTTTTCCGTGGCGCCGGGCGAGG
TGGTGGCCCTGGTCGGCGAATCGGGCTCGGGCAAGACCACCACGGCCCAGGCCGTGATCGGCCTTTTGGCCGACAACGGC
CACCGCGAGCACGGCAGCATCCGCCTGCAGGGCACCGAGGTCTCGGGCTGGCCGGCCGCACGCTGGAACGCCATCCGCGG
CCGCGTGGTCAGCCTGGTGCCGCAGGACCCCACCATGTCGCTGAACCCCGTGCGCACGGTGGGCGACCAGGTGGGCGAGA
TCCTGCGCATCCACGGACTGCGCGACCGCACGGCCGTGGAGGCGCGCGTGCTGGAGCTGCTGGCCCGCGTGGGCCTGTCC
CAGCCCGCGCTGCGCGCACGCCAGTATCCGCACGAACTGTCGGGCGGCATGCGCCAGCGCGTGCTGATCGCCATCGCCAT
CGCGCTGCGGCCCGCCCTCATCATTGCCGACGAGCCCACCAGCGCGCTGGACGTGACCGTGCAGCGGCGCATCCTGGACC
TGATCGACGCGCTGCGCCGCGAGACCGGCACGGCCGTGCTGCTGGTCACGCATGACCTGGGCGTGGCGGCCGACCGCTCG
CACCGCCTGGTCGTCATGCAGGGCGGCCGCATCCAGGAGCAGGGTCCCACGCTGGAGCTGCTGCGCAATCCGCAAAGCGC
CTATACGCGGCGACTGCTGGCCGATGCGCCTTCTCTGGCGCCCGCGCCGCGCCGCACGCCCAGGCCCGCCACGGCCGATG
ACTGGGCCATCGAGGTCGAGGACCTGGTGCACGAGTTCGCGGCGCCCGGCCATGCCTCGGCCCACGGGCGCGGCATCTTC
CGCGCCGTGGACGGCGTGTCGCTGCGCGTGCGCCGGGGCAGCACGCATGCCATCGTGGGCGAGTCAGGCTCGGGCAAGAC
CACCACCATCCGCGCCATCGTGGGCCTGGGCCGGCCCACGGCGGGCCGCATCCGCATCGAAGGCACCGAGGTCACGGGCC
TGCGCGGCGAGGCCCTGCGCCAGCTGCGCCGCCGCGTGCAGTTGGTCTACCAGAACCCGTTCAGTTCTCTGGACCCGCGC
CAGAGCGTGTTCGACATCATCGAGGAGCCCCTGCTGAACTTCGACCCGCTGCCGGCCGATGAGCGCCGCCGGCGCGTGCA
CGACATGCTGGAGCGCGTGGGCCTGCCGGCCGCCGTGCTGCAGCGGCGCCCGCATGCGCTGTCGGGCGGCCAGCGCCAGC
GCGTGGCGATTGCGCGCGCCCTGGTGCTGCAGCCGCAGGTGCTGGTGCTGGACGAGGCCGTATCGGCCCTGGACGTGACG
GTGCAGGCCCAGATCCTCGCCCTGCTCGCCCAGCTGCAGCAGGACCTGGGGCTGACCTATCTCTTCATCTCGCACGACCT
TGCCGTGGTGCGCCAGATTGCCGACACGGTGTCGGTGCTGCGCGCGGGCCGGGTGGTGGACGCGGGCAGCGTGGAGGAGG
TGTTCCAGCGCCCCACCAGCGACTACACGCGTGAACTCATGGACGCCATTCCCGGCAAAAGGAGCATTGATTTTGTCCCT
CATACCGCCTGA

Protein sequence :
MSAAIEERIHAAPAVATTAPVLEVQDLAVAYRDAAGQAQRVVHGVSFSVAPGEVVALVGESGSGKTTTAQAVIGLLADNG
HREHGSIRLQGTEVSGWPAARWNAIRGRVVSLVPQDPTMSLNPVRTVGDQVGEILRIHGLRDRTAVEARVLELLARVGLS
QPALRARQYPHELSGGMRQRVLIAIAIALRPALIIADEPTSALDVTVQRRILDLIDALRRETGTAVLLVTHDLGVAADRS
HRLVVMQGGRIQEQGPTLELLRNPQSAYTRRLLADAPSLAPAPRRTPRPATADDWAIEVEDLVHEFAAPGHASAHGRGIF
RAVDGVSLRVRRGSTHAIVGESGSGKTTTIRAIVGLGRPTAGRIRIEGTEVTGLRGEALRQLRRRVQLVYQNPFSSLDPR
QSVFDIIEEPLLNFDPLPADERRRRVHDMLERVGLPAAVLQRRPHALSGGQRQRVAIARALVLQPQVLVLDEAVSALDVT
VQAQILALLAQLQQDLGLTYLFISHDLAVVRQIADTVSVLRAGRVVDAGSVEEVFQRPTSDYTRELMDAIPGKRSIDFVP
HTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 48
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43