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Name : DelCs14_5218 (DelCs14_5218) Accession : YP_004490543.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 5872163 - 5873869 bp Length : 1707 bp Strand : - Note : TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: dac:Daci_1299 general secretory pathway protein E; SMART: ATPase, AAA+ type, core DNA sequence : ATGGAACCGATTGCCGGTGTCGAAGCCCCGATCAAGGGGCGGCTGGGCGAACGCCTGCTTTCCGCCGGCAAGCTGAACGA GCGCGATCTGCAAAACGCCCTGCAGGCGCAGCAGGAGCTGGGCGGCTACCTGGGCCAGGTGCTGGTCCAGCTGGGCGTGG TGGCGGAAGCCGACGTGGCCCAGGCGCTGTCCGAGCAACTGCACATGCGCTGGCTGCGCGCGGAAGAGTTTCCCGACCTG CTGCCCGATGTGCCGGGCCTGCTGGCCAGCTTTCTGGATGCGCAGTGCGTCTGCCCCATTTCGCTGCAGGACGGCGTGCT CGAAGTGGCCATGTCCGTGCCGCAGGACCCCTTCATTACCAAGGCGCTGCGCCTGGCCACCGGGTTGCAGATCAAGCCCG TGCTGGCGCTGGAAGCCGATATCCGCAAGGCCCTGTCCGAAGCCGGCCAGGAACCCGAAGGCGAAGAAGGCCAGGACTGG GAGTCGGACGCCACGGGCGGCGACTTCGTCGAGCATCTGAAGGACCTGGCCAGCGAGGCGCCGGTCATCCGCCTGGTCAC GGGCATCATTTCCCGCGCCATCGAGCTGCACGCCTCCGACATCCACCTGGAGCCCTTCGAGGCCGGCCTGCAGGTGCGCT ATCGCATGGACGGCGTGATCCATGCGGCCGAACTCGTGCCGCCCCGGCTGAGCGCGGCCGTGGGCTCGCGCGTCAAGCTG CTGGCCCATCTGGACATTGCCGAGCGGCGCCTGCCGCAGGACGGTCGCATCAAGACCCGCGCCAAGGGCCGCGAATTGGA CCTGCGTGTCTCCACCGCACCCACGGTGCATGGCGAGAGCATCGTCATGCGGGTGCTGGACCGCGCCAACGTGCGCCTGC GCCTGGAAAGCATGGGCTTCGAGGTCGATACGCTGGAGCGCTTCAACACCTTGCTGGCCAAGCCGCACGGCATCGTGCTG GTCACGGGGCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCGGCCCTGTCCAAGATCGACGCGGTTTCCAACAAGAT CATCACCGTCGAGGACCCGGTCGAGTACCAGCTCGATGGCATCAACCAGATCCAGGTCCATCCGCAGATCGACCTCACCT TTGCCAACGCCCTGCGCTCCATCCTGCGCCAGGACCCGGACATCATCATGATCGGAGAAATGCGTGACGGAGAAACCGCG CAGATCGCCGTGCAGTCCGCACTGACAGGTCACTTGGTGCTGTCCACGCTGCACACCAACACGGCCGCAGGCGCCGTCAC CCGCATGCGCGACATGGGGGTGGAGAGCTACCTGATCACGTCCTCGGTCAACGGCGTGCTGGCCCAGCGCCTGGTGCGCA CGCTGTGCTCGCACTGCAAGCAGCCTGACACGCTGCCGACCGCCGCCGTCGAGGGCAGCGGCCTCAAGCGTTTTTTGCGC GAGGGCTCGCCCATCTACCGCGCCGTCGGCTGCGAGCATTGCCGGGGCACGGGCTACAAGGGCCGTACCGGCATCCATGA ACTCATGGTCATCGACGAGCCGCTGCGCCGCGCCATCATCGAAGGCCAGGACGCCAACGCCCTGCATGCCATGGCGGCCA AGAGCGGCATGCTGAGCCTCTACGACGACGGCCTGCGCAAGGTGGCCTCGGGCGCCACCACGCTGGACGAAGTGCTGCGC GTGACCCAGGACCAGAGCGATGCCTGA Protein sequence : MEPIAGVEAPIKGRLGERLLSAGKLNERDLQNALQAQQELGGYLGQVLVQLGVVAEADVAQALSEQLHMRWLRAEEFPDL LPDVPGLLASFLDAQCVCPISLQDGVLEVAMSVPQDPFITKALRLATGLQIKPVLALEADIRKALSEAGQEPEGEEGQDW ESDATGGDFVEHLKDLASEAPVIRLVTGIISRAIELHASDIHLEPFEAGLQVRYRMDGVIHAAELVPPRLSAAVGSRVKL LAHLDIAERRLPQDGRIKTRAKGRELDLRVSTAPTVHGESIVMRVLDRANVRLRLESMGFEVDTLERFNTLLAKPHGIVL VTGPTGSGKTTTLYAALSKIDAVSNKIITVEDPVEYQLDGINQIQVHPQIDLTFANALRSILRQDPDIIMIGEMRDGETA QIAVQSALTGHLVLSTLHTNTAAGAVTRMRDMGVESYLITSSVNGVLAQRLVRTLCSHCKQPDTLPTAAVEGSGLKRFLR EGSPIYRAVGCEHCRGTGYKGRTGIHELMVIDEPLRRAIIEGQDANALHAMAAKSGMLSLYDDGLRKVASGATTLDEVLR VTQDQSDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-93 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-93 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DelCs14_5218 | YP_004490543.1 | general secretory pathway protein E | VFG0233 | Protein | 4e-78 | 45 |
