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Name : DelCs14_4347 (DelCs14_4347) Accession : YP_004489681.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Unknown Product : Restriction endonuclease, type I, EcoRI, R subunit/Type III Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 4918324 - 4921608 bp Length : 3285 bp Strand : - Note : KEGG: gur:Gura_1482 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal DNA sequence : ATGAGCGACCAAGCCACTGAACGCATCTTTCAAGACGACATCATTCGCCAGTTGCTGGCAAATGGCTGGTTGCTAGGCTC GCCGGAAAAGTACAACCGCGAACTGGCCTTGTACCCCGAGGATGCGCTGGGCTTTGTGCAAGAGACGCAAGACGCGCAGT GGCAAAGGTTTTGCGCCAACCACCCTAAGGATGCGGAGCAGAAGTTCTTGCAACTGATCGCCGCGCAACTGGGCAAGGCC GACCCCAACGCCACACACAAAGACAGCCGCACTTTTGGCACGCTGGGGGTGCTGCGCCACGAGCTGCGCGACCGCAATGC GCGCCTGTCGCTGTGCCAGTTCAAGCCCGAGCACGGCCTGAACCCGGACACGCTGGCCCGCTACGCCAAAAACCGCCTGC GCGTGGTGCCGGAGCTGGTGTACAGCCCGTGGTGTACCGATGCCTGTTTCACGGAGGCCGGTACCAAGGCCAAGGCGTGG CGCATTGACTTGGTGTTGTTTGTGAATGGCGTGCCGGTGGCCACGCTGGAGCTAAAGAGCGAGTTCAAGCAGGCGGTGGA CCGCGCTGTGCGGCAGTACAAAACCACACGCCTGCCGGTGGACCCGGTGGCCAAGAAGCCGGAGCCGCTGCTGACATTTA AGCGCGGTGCGCTGGTGCACTTTGCGGTGAGCCAGTACGAGGTGCACATGGCCACGCGGTTGGAGGGCGAGGAAACGTAC TTTTTGCCCTTTAACAAAGGCACGGCAGACGGCGGCGCGGGCAACGATGTGCCAGACGACATCCACCGTTATGCCACCGA TTACCTGTGGAACGAGGTGCTGCTGCCGGACAACCTGCTCAACATCCTGGCCCGCTTTGTGCACTTGCAAATTGAGGACA AGGAAGACTGGGAAGGCCGCAAGTACAAGAAGGAAAGCCTGATCTTCCCCCGCTACCACCAGTGGGACGTGGTTGGCAAG CTGCTGGCGGCAGCGCACAGCGAGGGGCCGGGGCAGAAATACCTGATTCAGCACAGCGCGGGCTCGGGCAAGTCCAACTC TATTGCCTGGGTGGCGCACCAGCTCTCGTCGCTGTACAAGCATGACGGCAAAAAGCAGTTTGACTCGGTGATTGTGGTGA CCGACCGCACCGTGCTTGACGCGCAGTTGCAAGACACGATCTACCAGTTTGAGCACACCGATGGCGTGGTGGGGCGCATC AACAACAAAGAGGGCGATGGTTCCAAGTCTGAAAAGCTGGCCGCAGCCCTGGAGTCTGCCCAGCCCATCATCATCGTCAC CATCCAGACCTTTCCGTTTGTATTGAAGGCGATTGAAAACAGCGTGAGCCTGAAGGAGCGCTGCTACGCCATCATTGCGG ACGAGGCGCATTCGTCGCAAAGCGGCTCAACGGCGCGGCAGCTCAAAGAGGTGCTGATGAAGGAAGCCGGTGAAGCGGGA GATGAGGCTGCCGAACTGGATAGCGACGACATCATTGCCGCCACGGTGGCGTCGCGCCGCGCATCGGGCAACCTGAGCTA CTTTGCTTTTACCGCCACGCCCAAGGCCAAGACGCTGGAGCTGTTTGGCCGCGTGCCGCGCCCGGACGAGGTGCCTTCCG CCACCAACAAGCCAGCGGCGTTCCACGTGTACAGCATGCGCCAAGCGATTGAGGAGGGCTTCATCCTCGACGTGCTGAAG AACTACACCAACTACAAGGTGGCTTACAAGCTGGCCCTGAAGGTGCAGGACGCCGATGCAGAGGTGGAAAGCAAGCGCGC CAAGGTGAAGCTGAACCAATGGGTGCGCCTGCATGACCACAACATTGCCCAGAAGGTGATGGTGATCGTGGAGCACTTCA AAGACAACGTGATGGGCTTGCTGGGCGGGCAGGCCAAGGCCATGGTGGTGACCAGCTCGCGCAAGGAGGCGGTGCGCTAC AAGCAGTGTTTCGATAAGTACATAACGGAGAAGGGCTACCAGAAGATTCACGCCATGGTGGCGTTTTCGGGTGAGGTGGA GTTCACCGACAAAGACCCGGCTGCGGCGGGCCAGATCGGCGAGAAGTTCACCGAGACGAATATGAACCCGAACCTCAAGG GCCGCGACATGCGCAAGGCTTTCGATTCGGACGACTACCAGGTGATGATCGTCGCCAACAAGTTCCAGACCGGGTTTGAC CAGCCCAAGCTGTGCGCCATGTATGTGGACAAGAAGCTGGTCGGGGTGGAGTGCGTGCAGACGCTGTCGCGCCTGAACCG CACCTACCCCAACAAGGCCGAGACGGGCACCTATGTGTTGGACTTCTTCAATGAGTCGGATGAGATTCTGGAGGCGTTTC AGCCGTACTACCAGACGGCGGAGCTGCTGGATGTGTCGGACCCGAACCTGATCTTTGCGCTGCAGGACAAGCTGCGGGCA GGGGGCATTTTTACTTGGCAGGAAGTGGAGCAGTTCTGCGCGGCGTTTTATGTGAAGAACAAGAGCAACGCGGCCATTGC CAACATTTGCAAGCCGGCGGTGCAACGCTGGCAGCTGCGCTACAAATCAGCGGTGGAGGCGTTCAAGATCGCCAAGGACA TGTTTGAACGCACCCAGAAGACGGGCGATGCCGTACTGATTGCGAACGCCGAGAAAAGCCTGAAGGAATGCCAGAAGGAA AAGGACGCGCTCGAAATCTTCAAGAAAGACCTGGGCACCTTTGTGCGGTTTTACGAGTTCATGTCGCAGATCGTGGATTA CGACGATACCGACTTGGAAAAGCTGAGTCTGTACGCGCGCAGCCTGCGGCCCATGCTGCGCGAAACCTTGCTGGACGAAG ACGACATTGACTTGGGCAACGTGGTGCTGAGCCACTACCGGGTGGCTAAGATACGCGAGCAGGATTTGGTGCTGAAAGAA AACAGCGCGGACTACAAGCTGGTGCCCGGCGAAGGCCTGGGCACGGCTAAGCCGCAGGACAAGAAGGAAGAGTTCCTGTC GCAGATCATCGACCGCCTGAACGAGGTGTTTGTGACCGACCAACTCACCGACAAGGACATGGTGAACTACGCCTACACCA TCCGCGACAAGGTGGGCGAGAACGCCAAGGTGATGAAGCAGATCGAGAACAACTCGCCCGAACAGGCCATGCTAGGCGAC TTCTCCAAGGCGATAGACGATGCCATCATGGACAGCAGTGAAGCCCATCAGAACCAGATGATGCAGTTGCTGGCTGACCC AGGCAAAGCGGCCAACTTTGCGCGGGTTGTGTTTGATCTGCTGGTGCAGGGTAATCCCCCCAATTTCCACCGTTACGAGA AGTAG Protein sequence : MSDQATERIFQDDIIRQLLANGWLLGSPEKYNRELALYPEDALGFVQETQDAQWQRFCANHPKDAEQKFLQLIAAQLGKA DPNATHKDSRTFGTLGVLRHELRDRNARLSLCQFKPEHGLNPDTLARYAKNRLRVVPELVYSPWCTDACFTEAGTKAKAW RIDLVLFVNGVPVATLELKSEFKQAVDRAVRQYKTTRLPVDPVAKKPEPLLTFKRGALVHFAVSQYEVHMATRLEGEETY FLPFNKGTADGGAGNDVPDDIHRYATDYLWNEVLLPDNLLNILARFVHLQIEDKEDWEGRKYKKESLIFPRYHQWDVVGK LLAAAHSEGPGQKYLIQHSAGSGKSNSIAWVAHQLSSLYKHDGKKQFDSVIVVTDRTVLDAQLQDTIYQFEHTDGVVGRI NNKEGDGSKSEKLAAALESAQPIIIVTIQTFPFVLKAIENSVSLKERCYAIIADEAHSSQSGSTARQLKEVLMKEAGEAG DEAAELDSDDIIAATVASRRASGNLSYFAFTATPKAKTLELFGRVPRPDEVPSATNKPAAFHVYSMRQAIEEGFILDVLK NYTNYKVAYKLALKVQDADAEVESKRAKVKLNQWVRLHDHNIAQKVMVIVEHFKDNVMGLLGGQAKAMVVTSSRKEAVRY KQCFDKYITEKGYQKIHAMVAFSGEVEFTDKDPAAAGQIGEKFTETNMNPNLKGRDMRKAFDSDDYQVMIVANKFQTGFD QPKLCAMYVDKKLVGVECVQTLSRLNRTYPNKAETGTYVLDFFNESDEILEAFQPYYQTAELLDVSDPNLIFALQDKLRA GGIFTWQEVEQFCAAFYVKNKSNAAIANICKPAVQRWQLRYKSAVEAFKIAKDMFERTQKTGDAVLIANAEKSLKECQKE KDALEIFKKDLGTFVRFYEFMSQIVDYDDTDLEKLSLYARSLRPMLRETLLDEDDIDLGNVVLSHYRVAKIREQDLVLKE NSADYKLVPGEGLGTAKPQDKKEEFLSQIIDRLNEVFVTDQLTDKDMVNYAYTIRDKVGENAKVMKQIENNSPEQAMLGD FSKAIDDAIMDSSEAHQNQMMQLLADPGKAANFARVVFDLLVQGNPPNFHRYEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 4e-133 | 41 |
