Gene Information

Name : DelCs14_4323 (DelCs14_4323)
Accession : YP_004489657.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : 3.5.2.6
Position : 4881846 - 4882628 bp
Length : 783 bp
Strand : -
Note : KEGG: dac:Daci_2332 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase

DNA sequence :

ATGTGCGCCGCGCTGCTCGCCTGTCTGTCACAGGCGGCGCTGGCGGCTGCAGAACTGCAGGACAAGCCCGAGTGGGACCG
CTTCTTTGCCGATGCCAAGGTCGATGGCAGCATCGTCGTGGTCGATGCCAGGGGCCAGGCCGAAGCCGTCTACGTCCACA
ACCGTGACCGCGCGGCGCGGCGCTACTCGCCCGCTTCCACCTTCAAGATCCCGCACAGCCTGTTCGCGCTGGACGCCGGG
CTGCTGCGCGATGAATTCCAGCGCATTCCCTGGGATGGCGTGAAGCGCCAGTTGCCGGCCTGGAATGCCGATCAGGACCT
GCGCTCTGCCATGCGCAACTCCACCCTGTGGGTGTACGAAGGCTTTGCCAGGGAGCTTGGCAGCGCGCGCGAGGCTGCCT
ACATGCGCAAGATCGACTACGGCAATGCGCTGGCCACGGGCGAGGCGCCGTTCTGGGTGGAGGGCGACCTGGCCATCTCG
GCGCTGGAGCAGGTGGCCTTCCTGCAGCGGCTGTACCGCAATCGGCTGCCATTGCCGGTGGAGCACCAGCGGCTGGTGAA
GGACGTGATGATCAACGAGGCCGGCCCGGACTGGATACTGCGCGCCAAAACCGGCTGGACGGGCCGTATCGGCTGGTGGG
TGGGCTGGGTGGAATGGCCGGCCGGCCCCGTGTTCTTCGCCATGAACATGGACACGCCCCACCGGCTGGCCGACCTGCCC
AAGCGCCAGGGCATCACGCGCGACATCCTGCGCTCCATCAACGCGTTGCCCAAGGCGCCGTAG

Protein sequence :

MCAALLACLSQAALAAAELQDKPEWDRFFADAKVDGSIVVVDARGQAEAVYVHNRDRAARRYSPASTFKIPHSLFALDAG
LLRDEFQRIPWDGVKRQLPAWNADQDLRSAMRNSTLWVYEGFARELGSAREAAYMRKIDYGNALATGEAPFWVEGDLAIS
ALEQVAFLQRLYRNRLPLPVEHQRLVKDVMINEAGPDWILRAKTGWTGRIGWWVGWVEWPAGPVFFAMNMDTPHRLADLP
KRQGITRDILRSINALPKAP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
blaOXA-2	YP_005176242.1	beta-lactamase OXA-2 protein	Not tested	ICEPmu1	Protein	7e-74	63
ACICU_00226	YP_001844885.1	Beta-lactamase class D	Not tested	AbaR20	Protein	2e-72	60

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
DelCs14_4323	YP_004489657.1	beta-lactamase	M95287.gene.p01	Protein	3e-74	63
DelCs14_4323	YP_004489657.1	beta-lactamase	JF795487.1.gene1.p01	Protein	4e-73	63
DelCs14_4323	YP_004489657.1	beta-lactamase	U63835.1.gene1.p01	Protein	3e-74	63
DelCs14_4323	YP_004489657.1	beta-lactamase	AF300985.1.gene1.p01	Protein	8e-71	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AF350424.1.gene1.p01	Protein	4e-69	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AF371964.1.gene1.p1	Protein	1e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AY139598.1.gene3.p01	Protein	2e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	JF800667.1.gene2.p01	Protein	2e-73	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AF315351.1.gene2.p01	Protein	6e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	GQ202693.1.gene2.p01	Protein	3e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	EF552405.1.gene1.p01	Protein	7e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AY289608.1.gene2.p01	Protein	5e-74	62
DelCs14_4323	YP_004489657.1	beta-lactamase	AF317511.1.gene5.p01	Protein	7e-73	61
DelCs14_4323	YP_004489657.1	beta-lactamase	L07945.1.gene1.p01	Protein	1e-74	61
DelCs14_4323	YP_004489657.1	beta-lactamase	Y10693.2.gene1.p2	Protein	2e-74	61
DelCs14_4323	YP_004489657.1	beta-lactamase	DQ522237.1.gene5.p01	Protein	2e-74	61
DelCs14_4323	YP_004489657.1	beta-lactamase	AF024602.1.gene3.p01	Protein	8e-73	60
DelCs14_4323	YP_004489657.1	beta-lactamase	AY500137.1.gene1.p01	Protein	4e-46	46
DelCs14_4323	YP_004489657.1	beta-lactamase	JN205800.1.gene6.p01	Protein	2e-44	44
DelCs14_4323	YP_004489657.1	beta-lactamase	HM015773.1.gene6.p01	Protein	2e-44	43
DelCs14_4323	YP_004489657.1	beta-lactamase	HQ700343.1.gene1.p01	Protein	1e-45	43
DelCs14_4323	YP_004489657.1	beta-lactamase	AY343493.1.gene1.p01	Protein	9e-42	43
DelCs14_4323	YP_004489657.1	beta-lactamase	AY423074.1.gene1.p01	Protein	2e-38	42