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Name : join (DelCs14_4116) Accession : YP_004489453.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Unknown Product : transposase IS3/IS911 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4639874 - 4641131 bp Length : 1258 bp Strand : - Note : KEGG: transposase IS3/is911 family protein; manually curated; PFAM: Transposase IS3/IS911 DNA sequence : ATGACTAGGCATACGGAGTCAATCGAGGTAGTCGTGAAGGACCAGCGCCGCAGGCACTGGTCCCTCGCAGAGAAGGCAGC GCTGGTGCGCCGAACCTACGAACCAAGCATGAGCGTGTCATTGGTCGCTCGGCAGGAAGGCGTTTCGGCTGGACTGCTGT TCCAATGGCGCAAGCTCGAACGCCAGGGTGCTTTGACCGCCGTCTCCGCTGGCGAGGCAGTCGTTCCCGCATCCGAGCTG GCGGCTGCCCGCGCGGAAATCTCCAAGCTGCAGCGCGTGCTCGGCAAGAAAATCTTGGAGAACGAAATCCTCAAGGAAGC CGTGGAGTACGCCGCAGAAAAAAGTGGATTGCGCGCTCGCCCTTGTTGCCCGGGGACGAGCAGTGAAAACGGTCTGCCGG ACGATGGGGCTGGTGCGCTCGCATGTGCGCGACCTGCTTGGGCGCGGTGAAGGCTGGGCCGATGGCCGCAGCCATCGCAC CCCCAGCGACGATGCCGAGCTGCTCGCCGAACTGCGCCAGGAAATTTCCGACTTGCCCAGCTATGGCTACCGACGTACCT GCGCCTTGGTGAACCGCCAGCGTGCGGCACGGGGCGCCCCGCGGGTCAACGCCAAACGCGTCTATCGCGTCATGGCACAA GCCGCTCTGCTGCTGCCCAAGGCGCCTCGCCGGCGCCAGTCCGCACGCACGCATGAAGGCCGTGTTGCGGTCTCGCGCAG CGACCTTCGATGGTGCTCCGATGGTCTGGAAATCAAGTGCGATTCGGGCCAGACCGTGACGGCCACGTTCGCCAAGGACT GCTGCGACCGTGAGGGGATGGTTTGGCGTGCATGGGAGGGCAAAGGGCTGCCAGGTGAGCCGGTACGCGAGATGCTCATC GAGGCCGTGGAGCGCCGCTTCGGCTCGGTCGAAGCGGTCCCGCAGGGCCAGGAGTTGGAGTTCCTCAGTGACAACGGCGG TGCCTACATCGCCGCCGAAACGAGGGCACTGGCACGCGCGCTGGGCCTGAAGCCCATTAACACTCCCGTCTGCAGCCCGC AGAGCAACGGCATGGCCGAGAGCTTCGTCAACACCTTCAAGCGCGACTATGTGGCGCGCATGGACCTGCGTGACGCGCAG ACGGTACTGGCGCAACTGCCAGCGGCTTTCGAGCACTTCAACGAGGTACATCCGCATTCTTCGCTGAAAAGGCGTTCGCC TCGGGAGTTCAGACGGCAACAGGCTGCAGGGGCTGACCAAGCGCTTTATTGCGAATAG Protein sequence : MTRHTESIEVVVKDQRRRHWSLAEKAALVRRTYEPSMSVSLVARQEGVSAGLLFQWRKLERQGALTAVSAGEAVVPASEL AAARAEISKLQRVLGKKILENEILKEAVEYAAEKKVDCALALVARGRAVKTVCRTMGLVRSHVRDLLGRGEGWADGRSHR TPSDDAELLAELRQEISDLPSYGYRRTCALVNRQRAARGAPRVNAKRVYRVMAQAALLLPKAPRRRQSARTHEGRVAVSR SDLRWCSDGLEIKCDSGQTVTATFAKDCCDREGMVWRAWEGKGLPGEPVREMLIEAVERRFGSVEAVPQGQELEFLSDNG GAYIAAETRALARALGLKPINTPVCSPQSNGMAESFVNTFKRDYVARMDLRDAQTVLAQLPAAFEHFNEVHPHSSLKRRS PREFRRQQAAGADQALYCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 7e-61 | 50 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 7e-61 | 50 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 7e-61 | 50 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 4e-61 | 50 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 8e-60 | 49 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 2e-60 | 49 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 5e-61 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| join | YP_004489453.1 | transposase IS3/IS911 family protein | VFG0608 | Protein | 3e-61 | 50 |
| join | YP_004489453.1 | transposase IS3/IS911 family protein | VFG0621 | Protein | 3e-61 | 50 |
| join | YP_004489453.1 | transposase IS3/IS911 family protein | VFG1732 | Protein | 9e-61 | 49 |
