Gene Information

Name : DelCs14_3570 (DelCs14_3570)
Accession : YP_004488917.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 4045401 - 4046216 bp
Length : 816 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: dac:Daci_3149 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACGCAGCGCCTGAGTGCTGATGCGGTGACGCTGCGCTACGGCGAGCGCACGATTTCGCAGGGCCTGTCCCTTGCCAT
TCCCGATGGTTCCTTCACCGTCATCGTGGGGCCGAACGCCTGCGGCAAGTCCACCCTGCTGCGCGCGCTGTCGCGGCTGC
TGGTGCCGGCTGCCGGGCAGGTCATCCTCGATGGCCGGCACATCTCGCAATTTCCCGCCAAGGAGGTGGCGCGGCGCCTG
GGCCTGCTGCCGCAAAGCGCGGTGGCGCCCGAGGGCATCACGGTGGCGGACCTGGTGGCGCGGGGGCGCTACCCCCATCA
ATCCTTCCTGAGGCAGTGGACGGACGCGGATGAGCAGGCCGTGGCCGAGGCCATGCAGGCCACCGATGTGGCAGCACTGT
CCGACCGCCTGCTGGACGAGCTGTCAGGCGGCCAGCGCCAGCGGGTGTGGATTGCGATGGTGCTGGCGCAGCAGACGCCG
ATCCTGTTGCTGGACGAGCCCACGACGTTCCTGGACATCGCCCACCAGATCGAGCTGATGGAGCTGCTGGCGGATCTCAA
CGATGCCGGCCGCACGGTGGTTGCGGTGCTGCACGACCTCAACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGC
GCGACGGGCGCATTGCCGCGCAGGGCGCGCCCGGGGCGATCTTCACGGAGCAGTTGGTGCAGGAGGTGTTCGGCCTGCCG
GCCGTGATCATGGCAGACCCTGTGTCGGGGACGCCCCTGGTGGTGCCCAGGGGGCGCAGGGCCGTGAATGCCATGAAGCG
CGCCGCAGGGAACTGA

Protein sequence :
MTQRLSADAVTLRYGERTISQGLSLAIPDGSFTVIVGPNACGKSTLLRALSRLLVPAAGQVILDGRHISQFPAKEVARRL
GLLPQSAVAPEGITVADLVARGRYPHQSFLRQWTDADEQAVAEAMQATDVAALSDRLLDELSGGQRQRVWIAMVLAQQTP
ILLLDEPTTFLDIAHQIELMELLADLNDAGRTVVAVLHDLNQACRYASHLIAMRDGRIAAQGAPGAIFTEQLVQEVFGLP
AVIMADPVSGTPLVVPRGRRAVNAMKRAAGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-68 55
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-66 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-66 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-66 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-66 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-58 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-64 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-64 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-54 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 9e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_3570 YP_004488917.1 iron-chelate-transporting ATPase BAC0164 Protein 2e-58 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_3570 YP_004488917.1 iron-chelate-transporting ATPase VFG0925 Protein 1e-82 62
DelCs14_3570 YP_004488917.1 iron-chelate-transporting ATPase VFG1042 Protein 2e-58 48