Gene Information

Name : DelCs14_3233 (DelCs14_3233)
Accession : YP_004488589.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 3663925 - 3664716 bp
Length : 792 bp
Strand : +
Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: dac:Daci_3568 3-deoxy-D-manno-octulosonate cytidylyltransferase

DNA sequence :
ATGCCCACCGCGCCCTTCACGGTTCTGATTCCTGCCCGCCTTGCCTCCAGCCGCCTGCCAGGCAAGCCCCTTGCAGACAT
TGCAGGCCTTCCCATGGTCGTGCGCGTGGCACAGCGTGCCGGCCTCAGCGGCGCCACGCGCTGCGTGGTCGCGGCCGATG
ACGAAAGCATCGTCGCCGCCTGCGCCGCGCATGGCGTTGCGGCCGTGCTCACGCGCAGCGACCACGCCAGCGGCAGCGAC
CGCCTGGCCGAGGCCTGCGAACTGCTGGGCCTGGATGGCGACGACATCGTCGTCAACGTCCAGGGCGACGAACCGTTGAT
CGCTCCCGATCTCATCGATGCCGTGGCCGCCCTGCTGCCGCAGCAGCCCTCGGCCAGCATGGGCACGGCGGCACATGCCA
TCGACAGCCTGGCCGACTTCACCAACCCGAACGTGGTCAAGGTCGTCTGCGATGCCCAGGGCATGGCCCACTATTTCAGC
CGCGCCCCCATCCCCTTTGCGCGTGAACATGCAAGCCAGGCATGGTGGGAGACGGCATCTCCAGCGGCAGCGCCGGGCCA
CCCCGGCTTCGCACCACTGCGCCACATTGGCATCTACAGCTACCGTGCCGGTTTCCTGCGCAGCTTCCCGCAGCTTTCTC
CCGCCCCTACCGAGGTGCTGGAGGCGCTGGAACAGTTGCGCGCGCTGTGGCACGGCCACCGCATCGCCGTCCACCTGACG
CCCCATGCACCAGGCCCCGGCGTGGACACCCCCGAAGACCTGGAGCGGGTGCGCGCCCGGTTGTCCGCCTGA

Protein sequence :
MPTAPFTVLIPARLASSRLPGKPLADIAGLPMVVRVAQRAGLSGATRCVVAADDESIVAACAAHGVAAVLTRSDHASGSD
RLAEACELLGLDGDDIVVNVQGDEPLIAPDLIDAVAALLPQQPSASMGTAAHAIDSLADFTNPNVVKVVCDAQGMAHYFS
RAPIPFAREHASQAWWETASPAAAPGHPGFAPLRHIGIYSYRAGFLRSFPQLSPAPTEVLEALEQLRALWHGHRIAVHLT
PHAPGPGVDTPEDLERVRARLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 1e-31 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 8e-32 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-31 41