|
Name : DelCs14_3219 (DelCs14_3219) Accession : YP_004488575.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Unknown Product : Fis family proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3649021 - 3651045 bp Length : 2025 bp Strand : - Note : TIGRFAM: Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR; PAS; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, propionate catabolism activator, N-terminal; PAS fold; DNA sequence : ATGAATGAATCAGTCGTGGCCCCTGTCCCTGGAACCCCGTCCGGCCCCCGCGCGGCATGGCCCCGTGTCGTCACCATAGG CCGCCACCGCATCGGCCGCGTGCTGGAGCGCATGTCCCTGGCGGTGGGCGACCAGGTGCGTGTGGAGCATGTCAGCGCGG CCTTTGACGACGCTGTGCAGGCCGTGCGCGCGCTGCAGGCGGTCGAGCCCATAGACGCCCTGGTGGCCGCCGGCGCCAGT GGTGCCTGGGTGCGCGAGCATGTCGACATTCCCGTGGTCATGATCGAGGTGCGCGGCTTCGATCTGCTGCAGGCGCTGGC CAGCGCGCGGGAATTGGCGCAGGCGGGCGGCACGCCGCGCATCGGGCTGGTGTCGTTTGACCATCCCTCGCCGCACCTGG CCCAGTTCGACGCGCTGTTCGGCGCCGGCATTGCCCAGTTCAGCTACCACGGGCCCGAGGATGCCCAGGCCTGCGTGCGT GCGCTGCAGGCCGCAGGCGTGGGTGCCGTGGTCGCGCCAGGGCTGGTTGCCGATCTGGCCGAGCAGGCCGGCATTCCTAG CGTGCTGCTGTACTCCGACGGCGCCGTGCTGCAGGCCCTGCGCGACGCGGTGCTGCTGGCCCGCCACCGCCATGCCGAGC GCGCCCGCCACCAGCGGCTGGAAACCGTGCTTGGCCAGTTGCAGGACGGCGTGGTCGCCGTGGATACGCAAGGCTGCATC CAGGCACTGAACCCCACCATGGCGGCCCTGCTGGGAGCGCCCGCCAGGGCGCTGCATGGCCGGCTGCTGGACGAGGTGGC GCCCGCGCTGGCGCTGGCACAGGCGCTGCAGTCGCAATCCCTGGAGCCCGAAGGCAGTGAAGACGTGGTCCAACTGGCCA TGCGCACCCTGGTGGTACGGCGCGCACCCATCGTGGAAAACGGCCAGCTCACGGGCGCCTTGCTGGTCTGCCGCGACCCC GCCACCATCCAGCGCGCCGACCGCCACCTGCGCGCCAACCGCAGCCTGCGCGGCGCGGGCGTGCGCTGGCGCATCGAAGA CTACGCGGGCGACAGCGAACCCGCCCAGCGCGTGCGCCGCCTGGCGCGCCAGTTCGCTGCCAGCGATGCCACCGTGCTCA TCCAGGGCGACAGCGGCACGGGCAAGGAGCTGCTGGCCCAGGGCATGCACCGCGCGAGCCGGCGCGCCGCCCAGCCCTTT CTGGCCGTCAACTGCGCGGCCCTGGGGGAAAGCCTGCTGGAGAGCGAACTCTTCGGCTACGACGAAGGCGCTTTCACCGG CGCGCGGCGCGGCGGCAAGACCGGGCTGATCGAGGCGGCCCATACGGGCACCTTGTTCCTGGACGAGATAGGGGACATGC CGCTGGCCCTGCAGTCCCGCCTGCTGCGCGTGCTGCAGGAGCGCGAAGTGCTGCGCGTGGGCTCCACCACGTCCGTGCCC GTGGACCTGCGCGTCATCGCCGCCACGCATGCCGATCTGGCGACCCTGGTCGAGCGCGGTGAATTCAGGCGCGACCTGTT CTACCGCCTGGCCGTGCTGCGCCTGGCCATGCCCGGACTGCACGAACGCGGACAGGGCGATGTCCAGGCCCTGGCCCGCA CCATGCTTGCGCGACGTTTGCGCACGCAGTCACTGCAGGCCGAGTCCTCTTCACTGGAGCCCTTGCTGGAAGCCCTGCTG GATTTGGCCGCCGCGCACCGCTGGCCCGGCAATGCGCGAGAGCTGGACAACTGGGTGGAGCGCCTGCTGGCCTGCCGCCA CGACCTGCGTGACGGCGCGGGCCGCGTGGACATGGGCCGGCTGCGGGAGCTGTTTCCTGAATGCGACGGGGCTGGGCAGG GTACCGTTCAGGCCCTGCCAGCACAGCAGCGGCAACTGCAATTGCGCGAGGCCCGGCGCGATGCCGAGCGCCAGCGCATG CGCGAGGTGCTGGAGCAGGTGCAGGGCGACCAGCGCCGCGCCTGCGAGATCCTGGGCATCAGCCGGGCCACGCTGTGGCG CAGGTTGCGTAGCCAAAACGACTGA Protein sequence : MNESVVAPVPGTPSGPRAAWPRVVTIGRHRIGRVLERMSLAVGDQVRVEHVSAAFDDAVQAVRALQAVEPIDALVAAGAS GAWVREHVDIPVVMIEVRGFDLLQALASARELAQAGGTPRIGLVSFDHPSPHLAQFDALFGAGIAQFSYHGPEDAQACVR ALQAAGVGAVVAPGLVADLAEQAGIPSVLLYSDGAVLQALRDAVLLARHRHAERARHQRLETVLGQLQDGVVAVDTQGCI QALNPTMAALLGAPARALHGRLLDEVAPALALAQALQSQSLEPEGSEDVVQLAMRTLVVRRAPIVENGQLTGALLVCRDP ATIQRADRHLRANRSLRGAGVRWRIEDYAGDSEPAQRVRRLARQFAASDATVLIQGDSGTGKELLAQGMHRASRRAAQPF LAVNCAALGESLLESELFGYDEGAFTGARRGGKTGLIEAAHTGTLFLDEIGDMPLALQSRLLRVLQEREVLRVGSTTSVP VDLRVIAATHADLATLVERGEFRRDLFYRLAVLRLAMPGLHERGQGDVQALARTMLARRLRTQSLQAESSSLEPLLEALL DLAAAHRWPGNARELDNWVERLLACRHDLRDGAGRVDMGRLRELFPECDGAGQGTVQALPAQQRQLQLREARRDAERQRM REVLEQVQGDQRRACEILGISRATLWRRLRSQND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 6e-72 | 41 |
